YinLiLin / hibayesLinks
Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
☆55Updated 3 months ago
Alternatives and similar repositories for hibayes
Users that are interested in hibayes are comparing it to the libraries listed below
Sorting:
- Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction☆46Updated 8 months ago
- RFMIX - Local Ancestry and Admixture Inference Version 2☆94Updated 3 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆39Updated 9 months ago
- Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)☆24Updated 3 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆43Updated 6 years ago
- RCC workshop, "Analysis of Genetic Data 2: Mapping Genome-wide Associations."☆26Updated 2 years ago
- Statistical tools for Quantitative Genetic Analyses☆38Updated last month
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- Haplotype based scans for selection☆137Updated 2 weeks ago
- STITCH - Sequencing To Imputation Through Constructing Haplotypes☆85Updated last month
- LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut☆36Updated 2 years ago
- Evolutionary Transcriptomics with R☆48Updated last month
- Pipeline to take VCF through to Selection Analysis.☆58Updated 3 years ago
- Enhanced version of the FastQTL QTL mapper☆71Updated 2 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆52Updated 9 months ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 8 months ago
- Methods for examining PCA locally along the genome.☆86Updated last year
- ☆20Updated 5 years ago
- R package to perform Bayesian Genome-Wide Association Studies☆41Updated 2 years ago
- ARG-based inference of selection using deep learning☆18Updated 2 years ago
- Generalized linear Mixed Model Association Tests☆44Updated last month
- Polygenic Adaptation Likelihood Method - Inferring natural selection on complex traits from whole-genome genealogies☆16Updated 5 years ago
- A set of tools for modelling ancestry patterns along the genome.☆23Updated last week
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆41Updated 2 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- Here we present a method to plot the outputs of RFMIX version 2☆29Updated last year
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆34Updated last year
- Fast analysis and visualization of latent clusters in population genetic data☆78Updated 3 years ago
- Perform GWAS using the FarmCPU model.☆24Updated last year
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆29Updated 6 years ago