YinLiLin / hibayesLinks
Individual-Level, Summary-Level and Single-Step Bayesian Regression Models for Genomic Prediction and Genome-Wide Association Studies
☆54Updated 3 months ago
Alternatives and similar repositories for hibayes
Users that are interested in hibayes are comparing it to the libraries listed below
Sorting:
- Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)☆24Updated 2 months ago
- RFMIX - Local Ancestry and Admixture Inference Version 2☆93Updated 2 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month
- Kinship Adjusted Multi-Loci Best Linear Unbiased Prediction☆46Updated 8 months ago
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆43Updated 6 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆38Updated 8 months ago
- RCC workshop, "Analysis of Genetic Data 2: Mapping Genome-wide Associations."☆26Updated 2 years ago
- A set of tools for modelling ancestry patterns along the genome.☆23Updated last week
- Generalized linear Mixed Model Association Tests☆44Updated 2 weeks ago
- LaTeX and associated files for lecture notes used in EEB 5348 at the University of Connecticut☆35Updated 2 years ago
- STITCH - Sequencing To Imputation Through Constructing Haplotypes☆85Updated last month
- R package to perform Bayesian Genome-Wide Association Studies☆41Updated 2 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆52Updated 9 months ago
- R package for pedigree inference based on SNP data☆28Updated 3 months ago
- Statistical tools for Quantitative Genetic Analyses☆38Updated last week
- Pipeline to take VCF through to Selection Analysis.☆58Updated 3 years ago
- ☆20Updated 5 years ago
- ☆18Updated last year
- Methods for examining PCA locally along the genome.☆86Updated last year
- Haplotype based scans for selection☆136Updated last month
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆41Updated 2 years ago
- Pinpoints the mutation favored by selection☆34Updated 4 years ago
- Polygenic Adaptation Likelihood Method - Inferring natural selection on complex traits from whole-genome genealogies☆16Updated 5 years ago
- ARG-based inference of selection using deep learning☆18Updated 2 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆32Updated last year
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- Perform GWAS with gemma in a simple pipeline☆27Updated 7 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated last week
- Sequence kernel association test (SKAT)☆52Updated 4 months ago
- Repository of common bioinformatics scripts☆39Updated 4 years ago