DaliangNing / iCAMP1Links
Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)
☆87Updated last month
Alternatives and similar repositories for iCAMP1
Users that are interested in iCAMP1 are comparing it to the libraries listed below
Sorting:
- Code for running analyses carried out in Stegen et al. 2013, ISME☆30Updated 7 years ago
- dada2 formatted nifH database☆12Updated last year
- Microbial ecological network visualization clustering☆132Updated 8 months ago
- FUNGuild: parsing OTUs into functional guilds☆123Updated last year
- Microbial co-occurrence network inferred from Earth Microbiome Project☆26Updated 5 years ago
- ☆13Updated 4 years ago
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆50Updated 3 years ago
- Dissimilarity Overlap Curve analysis☆11Updated 3 years ago
- DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data☆47Updated last year
- ☆50Updated 4 years ago
- ☆23Updated 6 years ago
- Helper Functions for Interactive Tree Of Life (iTOL)☆179Updated 2 weeks ago
- Integrated Network Analysis Pipeline☆18Updated 11 months ago
- Statistics and visualization for amplicon data☆72Updated 2 years ago
- This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools☆35Updated 2 months ago
- ☆12Updated last year
- Various functions for analysis of microbial community data☆47Updated last month
- Make Picrust2 Output Analysis and Visualization Easier☆169Updated last week
- Fantaxtic - Nested Bar Plots for Phyloseq Data☆32Updated last year
- This is an R package for element cycle analysis using metagenomic data.☆40Updated 4 months ago
- R scripts for performing co-occurrence analyses☆35Updated 10 years ago
- Utilities for community ecology analysis☆19Updated 5 years ago
- Fast expectation maximization for microbial source tracking☆133Updated last year
- 🍄 Qiime2 ITS classifiers for the UNITE database☆46Updated 3 months ago
- Data and scripts for amplicon pipeline☆26Updated 6 years ago
- MetaCompare☆19Updated last year
- This is the source code for multisamples ARGs profiling using SARG2.0 database☆46Updated 4 years ago
- ☆78Updated last year
- Normalized Stochasticity Ratio in community assembly☆28Updated last year
- Network construction, analysis, and comparison for microbial compositional data☆171Updated 7 months ago