Normalized Stochasticity Ratio in community assembly
☆29Oct 22, 2024Updated last year
Alternatives and similar repositories for NST
Users that are interested in NST are comparing it to the libraries listed below
Sorting:
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆92Oct 1, 2025Updated 5 months ago
- Various functions for analysis of microbial community data☆47Oct 1, 2025Updated 5 months ago
- EasyStat☆20Jul 31, 2025Updated 7 months ago
- ☆11Apr 5, 2021Updated 4 years ago
- ☆13Aug 13, 2024Updated last year
- Compare microbial co-occurrence networks based on the trans_network class of microeco package☆12Feb 15, 2026Updated 2 weeks ago
- R package for downstream Microbiome analysis☆31Dec 10, 2024Updated last year
- 📦BEEM-Static: An R package for inferring microbial interactions based on Lotka-Volterra models☆10Aug 24, 2021Updated 4 years ago
- ☆14Jun 24, 2019Updated 6 years ago
- R package for computing alpha and beta contributional diversity metrics☆10May 5, 2023Updated 2 years ago
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆33Jul 12, 2022Updated 3 years ago
- mvabund updates☆10Mar 10, 2024Updated last year
- 🐟Catalogue of Life toolkit for R☆14Nov 29, 2023Updated 2 years ago
- Checking Status of Plant Names based on The Plantlist and More☆29Aug 2, 2022Updated 3 years ago
- ☆11Apr 17, 2025Updated 10 months ago
- basicTrendline: an R package for adding trendline and confidence interval of basic linear or nonlinear models and show equation to plot.☆13May 4, 2022Updated 3 years ago
- Functions for phylogenetic analyses☆36Nov 10, 2025Updated 3 months ago
- Fast expectation maximization for microbial source tracking☆139May 9, 2024Updated last year
- An R package for data analysis in microbial community ecology☆269Updated this week
- The copyright of ggcor belongs to HouyunHuang who closed the account of github. Refer to the Citation for details☆42Jun 2, 2021Updated 4 years ago
- A comprehensive R package for deep mining microbiome☆191Nov 3, 2025Updated 4 months ago
- A functional profiler for metagenomes using FracMinHash☆20Jul 14, 2025Updated 7 months ago
- R package for plotting Whittaker biomes with ggplot2☆40Feb 12, 2025Updated last year
- Network construction, analysis, and comparison for microbial compositional data☆176Dec 18, 2025Updated 2 months ago
- Standardize taxonomy across different data sources☆22Jun 7, 2025Updated 8 months ago
- Analyse species-habitat associations in R☆22Feb 13, 2025Updated last year
- A Computation of Functional Spaces and Functional Diversity Indices☆30Dec 19, 2024Updated last year
- ☆24Jun 13, 2022Updated 3 years ago
- Fungal Genome Mapping Pipeline☆18Jun 9, 2019Updated 6 years ago
- Code for running analyses carried out in Stegen et al. 2013, ISME☆32Feb 23, 2018Updated 8 years ago
- ☆54Dec 30, 2020Updated 5 years ago
- R package for searching, downloading and analysis of EBI MGnify metagenomics data☆23Feb 13, 2026Updated 2 weeks ago
- rdacca.hp: an R package for hierarchical and variation partitioning in multiple regression and canonical analysis☆22Feb 22, 2025Updated last year
- PHANTASM: PHylogenomic ANalyses for the TAxonomy and Systematics of Microbes☆25Dec 4, 2023Updated 2 years ago
- Plot microbiome time series in parallel☆27Nov 7, 2023Updated 2 years ago
- R package for microbial pangenomics☆24Apr 12, 2022Updated 3 years ago
- Everything is Linkable☆211Oct 22, 2025Updated 4 months ago
- Piecewise Structural Equation Modeling in R☆175Sep 2, 2025Updated 6 months ago
- SparCC is a Python module for calculating correlations in compositional data☆32May 22, 2024Updated last year