Alternatives and similar repositories for Rcoding:

Users that are interested in Rcoding are comparing it to the libraries listed below

• YongxinLiu / Culturome
  ☆25Updated last year
• YongxinLiu / Zhang2018SCLS
  Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)
  ☆32Updated 5 years ago
• mestaki / qiime2-to-BugBase
  ☆12Updated 3 years ago
• YongxinLiu / Zhang2019NBT
  Scripts for stat and plot figures in rice microbiome paper
  ☆31Updated 3 months ago
• microbiota / Zhang2019NBT
  Scripts for stat and plot figures in rice microbiome paper
  ☆19Updated 5 years ago
• GRONINGEN-MICROBIOME-CENTRE / DMP
  Codes and sample data supporting the Dutch Microbiome Project. The preprint is currently available at https://www.biorxiv.org/content/10.…
  ☆33Updated 3 years ago
• YongxinLiu / MicrobiomeProtocol
  Microbiome Protocol eBook related documents and scripts.
  ☆46Updated 3 years ago
• YongxinLiu / Amplicon2022
  High throughput sequencing -- Amplicon sequencing, mainly include 16S, 18S and ITS for microbiome analysis
  ☆15Updated 2 years ago
• Asa12138 / pctax
  Professional Comprehensive Omics Data Analysis
  ☆14Updated 2 months ago
• iMetaScience / iMetaPlot
  iMeta teaches you to plot
  ☆50Updated last year
• ChiLiubio / file2meco
  Transform files to the microtable object with microeco package
  ☆24Updated 2 months ago
• YongxinLiu / UsearchChineseManual
  USEARCH中文帮助文档(USEARCH Chinese manual)
  ☆23Updated 6 months ago
• benjjneb / LRASManuscript
  Reproducible Analyses accompanying DADA2 + PacBio Manuscript
  ☆31Updated 4 years ago
• Mengting-Maggie-Yuan / warming-network-complexity-stability
  Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"
  ☆46Updated 3 years ago
• wangzlab / COPD_multiomics
  This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…
  ☆30Updated 2 years ago
• yedeng-lab / iNAP
  Integrated Network Analysis Pipeline
  ☆15Updated last month
• YongxinLiu / Amplicon2017
  Data and scripts for amplicon pipeline
  ☆25Updated 5 years ago
• microbiota / amplicon
  Statistics and visualization for amplicon data
  ☆70Updated last year
• taowenmicro / phyloseq_translate
  phyloseq R
  ☆11Updated 5 years ago
• YongxinLiu / Liu2020ProteinCell
  Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome
  ☆39Updated 4 years ago
• joshuakirsch / pseudoR
  ☆15Updated 3 months ago
• LorMeBioAI / MBPD
  ☆15Updated 2 months ago
• ththi / Microbial-Interkingdom-Suppl
  Scripts and data for Duran & Thiergart et al. Cell, 2018
  ☆24Updated 5 years ago
• kosticlab / universe_of_genes_scripts
  Code for running the analysis in our universe of genes project
  ☆8Updated 5 years ago
• microUCPH / amplicon_data_analysis
  Collection of notebooks describing the basic analysis workflow for a 16S rRNA gene amplicon sequencing project
  ☆11Updated 2 years ago
• caozhichongchong / arg_ranker
  ☆28Updated last year
• qichao1984 / NCyc
  ☆49Updated 4 years ago
• taowenmicro / EasyStat
  EasyStat
  ☆17Updated 3 years ago
• nearinj / Comparison_of_DA_microbiome_methods
  ☆55Updated 11 months ago
• xielab2017 / EasyMicroPlot
  R package for downstream Microbiome analysis
  ☆27Updated 2 months ago