Alternatives and similar repositories for phyloseq_translate

Users that are interested in phyloseq_translate are comparing it to the libraries listed below

• TongZhou2017 / itol.toolkit
  Helper Functions for Interactive Tree Of Life (iTOL)
  ☆173Updated this week
• YongxinLiu / Metagenome
  Metagenome analysis pipeline
  ☆99Updated 4 years ago
• taowenmicro / ggClusterNet
  Microbial ecological network visualization clustering
  ☆126Updated 6 months ago
• microbiota / amplicon
  Statistics and visualization for amplicon data
  ☆71Updated 2 years ago
• YongxinLiu / EasyMicrobiome
  ☆120Updated last month
• mgoeker / table2itol
  Generating iToL annotations from Spreadsheet or CSV files
  ☆104Updated 5 years ago
• cafferychen777 / ggpicrust2
  Make Picrust2 Output Analysis and Visualization Easier
  ☆156Updated this week
• YongxinLiu / Zhang2018SCLS
  Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)
  ☆32Updated 6 years ago
• SegataLab / lefse
  ☆84Updated last year
• Mengting-Maggie-Yuan / warming-network-complexity-stability
  Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"
  ☆50Updated 3 years ago
• YongxinLiu / Note
  ☆126Updated 3 years ago
• taowenmicro / EasyStat
  EasyStat
  ☆19Updated last month
• ParkinsonLab / Metatranscriptome-Workshop
  Metatranscriptomics Tutorial
  ☆63Updated 2 years ago
• YongxinLiu / MicrobiomeProtocol
  Microbiome Protocol eBook related documents and scripts.
  ☆49Updated 4 years ago
• YongxinLiu / Amplicon2017
  Data and scripts for amplicon pipeline
  ☆26Updated 6 years ago
• DaliangNing / iCAMP1
  Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)
  ☆86Updated 7 months ago
• YongxinLiu / UsearchChineseManual
  USEARCH中文帮助文档(USEARCH Chinese manual)
  ☆25Updated last year
• biofuture / Ublastx_stageone
  This is the source code for multisamples ARGs profiling using SARG2.0 database
  ☆46Updated 4 years ago
• biobakery / biobakery_workflows
  bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validate…
  ☆117Updated 3 months ago
• qichao1984 / NCyc
  ☆50Updated 4 years ago
• YongxinLiu / Liu2020ProteinCell
  Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome
  ☆41Updated 5 years ago
• emblab-westlake / MbioAssy
  ☆15Updated 2 months ago
• grimmlab / MicrobiomeBestPracticeReview
  Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
  ☆120Updated last year
• Weidong-Chen-Microbial-Ecology / Stochastic-assembly-of-river-microeukaryotes
  ☆14Updated 6 years ago
• cozygene / FEAST
  Fast expectation maximization for microbial source tracking
  ☆129Updated last year
• anw-sh / silva-138_classifiers
  Classifiers trained on commonly used variable regions of Prokaryotic 16S rRNA genes
  ☆16Updated last year
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆126Updated 2 months ago
• YongxinLiu / Culturome
  ☆28Updated last year
• iMetaScience / iMetaPlot
  iMeta teaches you to plot
  ☆53Updated 2 years ago
• donovan-h-parks / STAMP
  Statistical Analysis of Metagenomic Profiles
  ☆93Updated 5 years ago