phyloseq R
☆12Sep 18, 2019Updated 7 years ago
Alternatives and similar repositories for phyloseq_translate
Users that are interested in phyloseq_translate are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repo for a Microbiome Protocol☆10Apr 26, 2018Updated 8 years ago
- EasyStat☆21Updated this week
- Using R language in microbiome analysis☆362May 10, 2023Updated 3 years ago
- EasyMultiOmics: An R package for comprehensive multi-omics data mining in systematic microbiome research☆109Updated this week
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24May 3, 2019Updated 7 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆31Mar 29, 2019Updated 7 years ago
- ☆11Mar 11, 2025Updated last year
- Prediction of horizontal gene transfer (HGT) using graph convolutional network☆13Apr 25, 2022Updated 4 years ago
- Microbial ecological network visualization clustering☆156Nov 20, 2025Updated 10 months ago
- ☆125Oct 12, 2021Updated 4 years ago
- This repository contains computer codes for main analyses of the manuscript titled 'Multi-omic Landscape of Airway Microbe-Host Interacti…☆35Aug 16, 2022Updated 4 years ago
- ☆29Jan 16, 2024Updated 2 years ago
- GitKraken lesson (forked from HBS-RCS)☆10Mar 20, 2026Updated 6 months ago
- Workshop materials for SFSU SCIP 2022.☆16Jun 6, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A package for the analysis of how drivers affect multiple functions in a system.☆17May 23, 2022Updated 4 years ago
- A CNN based model to predict the efficacy of Cas12a sgRNAs in diagnostic scenarios.☆12Feb 29, 2024Updated 2 years ago
- A simple plot library☆53Jul 23, 2017Updated 9 years ago
- ☆15Feb 7, 2025Updated last year
- ☆13Jun 4, 2023Updated 3 years ago
- ☆12Dec 22, 2025Updated 9 months ago
- Evodictor is a software package for learning patterns and predicting the future of evolution by gain/losses of given traits☆14Sep 27, 2024Updated 2 years ago
- ☆15Mar 14, 2023Updated 3 years ago
- This repository contains teaching material for the 3rd International Summer School on Non-Targeted Metabolomics Data Mining for Biomedica…☆12Aug 25, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆16Mar 21, 2023Updated 3 years ago
- ☆19Aug 29, 2025Updated last year
- rdacca.hp: an R package for hierarchical and variation partitioning in multiple regression and canonical analysis☆23Feb 22, 2025Updated last year
- SourceTracker2☆92Jul 10, 2024Updated 2 years ago
- GeneBac: a modular framework for predicting antibiotic resistance from DNA sequence.☆18Jan 3, 2024Updated 2 years ago
- MicrobiomeReview☆11Jun 6, 2023Updated 3 years ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- Reference-free quality assessment for Hi-C sequencing data☆13Apr 30, 2024Updated 2 years ago
- A repository for the lessons and notebooks used for Binder tutorials☆20Aug 4, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Software to trim the ITS region of FASTQ sequences for amplicon sequencing analysis☆19Aug 17, 2026Updated last month
- ☆24Apr 29, 2026Updated 4 months ago
- Code used to analyse and plot metadata of metagenomic binning tools☆14Aug 22, 2024Updated 2 years ago
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- ☆24Mar 2, 2019Updated 7 years ago
- Scripts for calculating features and regression of prokaryote OGT☆26Feb 13, 2024Updated 2 years ago
- A 'time'-like utility for Unix that measures peak memory usage☆18Jun 5, 2024Updated 2 years ago