wangnq111 / LorMe
LorMe package for R:Lightening One-code Resolving Microbial Ecology Program
☆10Updated 2 months ago
Alternatives and similar repositories for LorMe:
Users that are interested in LorMe are comparing it to the libraries listed below
- Scripts for stat and plot figures in rice microbiome paper☆19Updated 5 years ago
- Scripts for stat and plot figures in rice microbiome paper☆31Updated 4 months ago
- R implementation of the LEfSe method☆56Updated last week
- Microbiome Protocol eBook related documents and scripts.☆47Updated 3 years ago
- ☆45Updated 5 years ago
- Microbiome Projects from the Department of Genetics and Department of Gastroenterology and Hepatology , University Medical Centre Groning…☆57Updated 5 months ago
- Create KEGG.db Package☆60Updated last year
- Transcriptomics Visualization R package.☆69Updated last year
- Pipeline & Reproducible analysis examples for amplicon and metagenome in microbiome☆39Updated 4 years ago
- A simple plot library☆52Updated 7 years ago
- iMeta teaches you to plot☆50Updated last year
- repository of the 2-day course "First steps with R in Life Sciences" from SIB-training☆45Updated 3 weeks ago
- an R/Shiny application for interactive creation of Circos plot☆48Updated last year
- ☆20Updated 5 years ago
- Transform files to the microtable object with microeco package☆25Updated 2 months ago
- Statistics and visualization for amplicon data☆71Updated last year
- Generalized Reporter Score-based Functional Enrichment Method for Omics Data☆67Updated last month
- Scripts and data for Duran & Thiergart et al. Cell, 2018☆24Updated 5 years ago
- My own tools code for NGS data analysis (Next Generation Sequencing)☆29Updated 5 years ago
- Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)☆32Updated 5 years ago
- ☆55Updated 11 months ago
- Metagenomic sequence data analysis pipeline☆29Updated 3 months ago
- Microbial ecological network visualization clustering☆103Updated last week
- Archive: R functions for Analysis of Composition of Microbiomes (ANCOM). Please check our ANCOMBC R package for the most up-to-date ANCOM…☆61Updated 2 years ago
- Analysis of (gut) microbiome in Qiime2 and R.☆17Updated 6 months ago
- The copyright of ggcor belongs to HouyunHuang who closed the account of github. Refer to the Citation for details☆35Updated 3 years ago
- The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…☆41Updated last year
- Translate Words or Sentences via Online Translators☆53Updated 3 months ago
- Analysis framework for integrating gut microbiome and host gene expression data☆32Updated 2 years ago
- shiny app for WGCNA...☆28Updated 2 months ago