qichao1984 / SCycDBLinks
☆14Updated 3 months ago
Alternatives and similar repositories for SCycDB
Users that are interested in SCycDB are comparing it to the libraries listed below
Sorting:
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆31Updated 3 years ago
- ☆49Updated 4 years ago
- ☆52Updated 2 weeks ago
- code repo for mobileOG-db☆39Updated last month
- ☆26Updated 2 years ago
- ☆17Updated 8 months ago
- Downstream processing of VAMB binning for Viral Elucidation☆50Updated last year
- EzAAI - High Throughput Prokaryotic AAI Calculator☆42Updated last week
- MicrobeCensus estimates the average genome size of microbial communities from metagenomic data☆46Updated 5 years ago
- This program is designed for annotation of antimicrobal resistance(AMR), transposon(Tn) and integron(In) in bacteria.☆21Updated 2 years ago
- ☆20Updated 10 months ago
- http://huttenhower.sph.harvard.edu/waafle☆18Updated 7 months ago
- ☆13Updated 7 years ago
- The Prokaryotic Genomics and Comparative Genomics Analysis Pipeline☆38Updated 2 years ago
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆16Updated 3 years ago
- Improvement of metagenome-assembled genomes☆53Updated 5 years ago
- Scripts to quality control for metagenomic raw data, including removing the adapters, low quality reads, bases or PCR duplicates☆18Updated 4 years ago
- Fast and accurate Average Genome Size and 16S rRNA gene Average Copy Number computation in metagenomic data☆14Updated 6 months ago
- Structural and functional annotation of eukaryotic metagenome-assembled genomes☆22Updated 2 years ago
- General procedure for making QIIME 2 compatible SILVA reference files☆20Updated 9 months ago
- ☆56Updated last year
- ☆32Updated last month
- SCAPP is a plasmid assembly tool. This tool is described in our paper: https://microbiomejournal.biomedcentral.com/articles/10.1186/s4016…☆32Updated 2 years ago
- An R package identifying horizontal gene co-transfer between bacteria using association analysis and whole-genome sequences☆26Updated 2 years ago
- ☆25Updated 6 years ago
- ☆13Updated last year
- This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools☆32Updated 3 weeks ago
- This is the source code for ARGs-OAP v2.0 construction☆12Updated 5 years ago
- A toolbox for improving metagenome-assembled genomes.☆63Updated 4 years ago
- Calculate assocations between genes and traits☆23Updated 4 months ago