☆21Apr 1, 2025Updated last year
Alternatives and similar repositories for SCycDB
Users that are interested in SCycDB are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆39Jul 12, 2022Updated 4 years ago
- ☆64Dec 30, 2020Updated 5 years ago
- Parser for Ghost Koala☆10Aug 23, 2018Updated 8 years ago
- HMM-based identification and categorization of iron genes and iron gene operons in genomes and metagenomes☆70Sep 14, 2026Updated last month
- A platform for targeted annotation of (meta)genomic and (meta)transcriptomic datasets using HMM sets.☆20Aug 7, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆15Jun 23, 2026Updated 3 months ago
- EnDED is a program that aims to detect environmentally-driven ("indirect") edges in an association network.☆10Dec 1, 2023Updated 2 years ago
- A toolbox for improving metagenome-assembled genomes.☆64Jun 2, 2021Updated 5 years ago
- A deep learning based approach to predict Antibiotic Resistance Genes (ARGs) from metagenomes. It provides two models,deepARG-SS and deep…☆60Apr 30, 2026Updated 5 months ago
- Utility to analyse a group of closely related MAgs/Genomes/bins/SUBs of more or less dubious origin☆15Sep 24, 2024Updated 2 years ago
- A scalable high-throughput metabolic and biogeochemical functional trait profiler☆233Mar 24, 2026Updated 6 months ago
- Fast and accurate Average Genome Size and 16S rRNA gene Average Copy Number computation in metagenomic data☆17Dec 20, 2024Updated last year
- ☆30Aug 2, 2026Updated 2 months ago
- Instantaneous Metagenome Taxonomic Profiling with MetaKSSD☆27Nov 3, 2025Updated 11 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 10 months ago
- Pathway-based and phylogenetically adjusted quantification of competition and cooperation between microbial species☆22Mar 17, 2021Updated 5 years ago
- ☆53May 29, 2026Updated 4 months ago
- Protocol for finding informative protein families and then using them to score omic samples☆19Jul 27, 2022Updated 4 years ago
- Protocol for finding informative protein families and then using them to score metagenomic sets.☆10Oct 11, 2021Updated 5 years ago
- Tool to estimate genome quality of microbial eukaryotes☆48Aug 14, 2026Updated 2 months ago
- Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …☆32May 22, 2020Updated 6 years ago
- A wrapper to identify, bin, classify, and predict host-viral relationship for viruses☆92Dec 27, 2024Updated last year
- ☆18Jan 12, 2026Updated 9 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- some useful scripts for working with genomics and sequencing data☆18Oct 31, 2019Updated 6 years ago
- A tool to assemble high-quality phages from metagenomes.☆28Sep 10, 2026Updated last month
- ☆21Dec 15, 2020Updated 5 years ago
- HGTector2: Genome-wide prediction of horizontal gene transfer based on distribution of sequence homology patterns.☆150Sep 21, 2023Updated 3 years ago
- ☆20Jan 12, 2017Updated 9 years ago
- dada2 formatted nifH database☆13May 17, 2024Updated 2 years ago
- Binning Virus Genomes from Metagenomes☆76Jul 13, 2022Updated 4 years ago
- Read alignment statistics for metagenomics☆408Updated this week
- [ACL 2024] FactPICO☆12Feb 26, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- This is a repository for CAMPER.☆18Mar 18, 2024Updated 2 years ago
- A tool to detect RRNPP-type quorum sensing systems☆10Mar 24, 2023Updated 3 years ago
- MGnify API toolkit☆18Jan 31, 2025Updated last year
- ☆23Jan 6, 2026Updated 9 months ago
- SemiBin: metagenomics binning with self-supervised deep learning☆175Updated this week
- ☆21Mar 15, 2023Updated 3 years ago
- Integrated Network Analysis Pipeline☆19Dec 19, 2024Updated last year