steineggerlab / Metabuli-App
☆30Updated 2 months ago
Alternatives and similar repositories for Metabuli-App
Users that are interested in Metabuli-App are comparing it to the libraries listed below
Sorting:
- Universal and efficient core gene phylogeny with Foldseek and ProstT5☆55Updated last month
- a python package for automated generation of phylogenetic trees from genbank files☆21Updated 2 months ago
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆37Updated 4 months ago
- Influenza genome analysis Nextflow workflow☆26Updated last month
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆36Updated 2 months ago
- UFCG: Universal Fungal Core Genes☆32Updated 3 months ago
- Nail is an Alignment Inference tooL☆47Updated this week
- Improved Inference of Ortholog Groups using Hidden Markov Models☆34Updated 2 months ago
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆27Updated last month
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆23Updated last year
- Unified Human Gut Virome Catalog☆31Updated 9 months ago
- Bacterial GWAS analysis☆40Updated 3 weeks ago
- SHOOT.bio - the phylogenetic search engine☆24Updated last year
- ☆26Updated last year
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆58Updated 4 months ago
- MetaMLST is a computational tool for in-silico Multi-Locus Sequence Typing from metagenomic data.☆15Updated 2 years ago
- A Generative Pre-Trained Transformer Package for Pangenomes☆50Updated 11 months ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆37Updated 3 weeks ago
- A toolkit for prokaryotic comparative genomics☆48Updated 3 months ago
- Python bindings for the TaxonKit library☆39Updated this week
- create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks☆44Updated 9 months ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆35Updated 2 weeks ago
- ☆17Updated 2 years ago
- A nextflow pipeline for decontamination of short reads, long reads and contigs☆44Updated 4 months ago
- ☆70Updated last week
- A python library for predicting phage lifestyle based on genome sequence☆37Updated last year
- Genomic sequence aligner☆23Updated last month
- A package to annotate protein sequences☆58Updated 2 months ago