☆41Apr 9, 2026Updated 4 months ago
Alternatives and similar repositories for Metabuli-App
Users that are interested in Metabuli-App are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.☆182Jul 22, 2026Updated last month
- Viral genome coverage evaluation for metagenomic diagnostics☆27Jul 9, 2026Updated last month
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆38Jun 4, 2026Updated 2 months ago
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆91Mar 12, 2026Updated 5 months ago
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- UFCG: Universal Fungal Core Genes☆36Jul 29, 2025Updated last year
- ☆28May 22, 2025Updated last year
- Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!☆46Jun 1, 2026Updated 3 months ago
- ☆20Jan 13, 2026Updated 7 months ago
- GraphSNP: Using graph approach to investigate outbreak cluster and transmission in a web browser☆13Oct 5, 2025Updated 10 months ago
- LexicMap: efficient sequence alignment against millions of prokaryotic genomes☆226Aug 22, 2026Updated last week
- Tool for exploring sequence alignment algorithms☆14Aug 30, 2024Updated 2 years ago
- Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.☆110Jan 22, 2026Updated 7 months ago
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆263May 13, 2026Updated 3 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Tools for analyzing trees☆13Apr 16, 2025Updated last year
- Fast and space-efficient taxonomic classification of long reads☆46Jul 16, 2026Updated last month
- Plasmid analysis using rearrangement distances☆56Jul 19, 2026Updated last month
- Graph-based assembly phasing☆102Nov 25, 2025Updated 9 months ago
- A comprehensive prokaryotic genome annotation pipeline☆91Aug 18, 2026Updated 2 weeks ago
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆62Updated this week
- A rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller.☆32Aug 19, 2026Updated 2 weeks ago
- 🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes☆86Aug 24, 2026Updated last week
- Bin Chicken - recovery of low abundance and taxonomically targeted metagenome assembled genomes (MAGs) through strategic coassembly☆79Jul 29, 2026Updated last month
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Fast viral consensus genome reconstruction☆27Jun 19, 2026Updated 2 months ago
- BRICK creates a BRIG-like interactive data visualisation for bacterial genome annotations and comparisons☆22Dec 9, 2025Updated 8 months ago
- De novo VIral Genome Annotator☆24Jan 11, 2026Updated 7 months ago
- Reorients assembled microbial sequences☆145Jun 30, 2026Updated 2 months ago
- Mapping NCBI Genbank accession to GTDB accession☆14Feb 13, 2021Updated 5 years ago
- A new high-resolution long-read metagenome assembler for even noisy reads☆167Jul 3, 2026Updated last month
- Terminal viewer for pdb files☆22Jan 5, 2026Updated 7 months ago
- Interactive phylogenetic tree viewer/editor☆49Jul 12, 2023Updated 3 years ago
- Official repo for paper "AlphaFold-Multimer accurately captures interactions and dynamics of intrinsically disordered protein regions"☆17Dec 8, 2024Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Eukfinder: A pipeline to retrieve microbial eukaryote genomes from metagenomic sequencing data☆29Jan 15, 2026Updated 7 months ago
- A Python package to update the MLST database for the mlst tool.☆31Jul 22, 2026Updated last month
- Ultrafast identification of signature sequences in microbial genomes☆20Updated this week
- Experiments with using BIGSI data structure for metagenomic and QC applications☆19Aug 12, 2024Updated 2 years ago
- MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.☆229May 9, 2026Updated 3 months ago
- Pharokka is a rapid standardised annotation tool for bacteriophage genomes and metagenomes.☆227Aug 16, 2026Updated 2 weeks ago
- A hybrid assembly and MAG recovery pipeline (and more!)☆118Updated this week