steineggerlab / Metabuli-AppLinks
☆36Updated last week
Alternatives and similar repositories for Metabuli-App
Users that are interested in Metabuli-App are comparing it to the libraries listed below
Sorting:
- Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5☆82Updated last month
- UFCG: Universal Fungal Core Genes☆34Updated 5 months ago
- A Pyrodigal extension to predict genes in giant viruses and viruses with alternative genetic code.☆20Updated last month
- A package to annotate protein sequences☆60Updated 10 months ago
- Detection of incorrectly labeled sequences across kingdoms☆87Updated 3 years ago
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated 3 months ago
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆95Updated 7 months ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated last month
- Python bindings for the TaxonKit library☆41Updated 3 weeks ago
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆63Updated last year
- a python package for automated generation of phylogenetic trees from genbank files☆23Updated last month
- Metaphor: a general-purpose workflow for assembly and binning of metagenomes☆40Updated last month
- ☆31Updated 4 years ago
- create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks☆57Updated 2 weeks ago
- Unified Human Gut Virome Catalog☆39Updated last month
- Pipeline for major biological analyses.☆36Updated 3 years ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆70Updated 3 weeks ago
- ☆31Updated last year
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆29Updated 8 months ago
- A workflow and scripts for large-scale antiSMASH analyses☆46Updated 8 months ago
- ☆52Updated 7 months ago
- SHOOT.bio - the phylogenetic search engine☆27Updated 2 years ago
- ViromeQC is a computational tool to benchmark and quantify non-viral contamination in VLP-enrihed viromes. ViromeQC provides an enrichmen…☆20Updated 3 years ago
- BiG-MEx implementation as Docker images and R packages☆13Updated 3 years ago
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆25Updated last year
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Updated 2 months ago
- Python package to plot a phylogenetic tree on an existing matplotlib axis.☆27Updated 5 months ago
- A Python package for obtaining complete lineages and the lowest common ancestor (LCA) from a set of taxonomic identifiers☆52Updated last month
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆39Updated 3 months ago