Homology-based ANI estimation at unprecedented scales🦀
☆25Oct 4, 2026Updated 2 weeks ago
Alternatives and similar repositories for TurboANI
Users that are interested in TurboANI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A pure rust reimplementation of rapid-gzip by Maximilian Knespel and Holger Brunst☆21Aug 10, 2026Updated 2 months ago
- Fast and Memory Efficient Genome Sketching via HyperLogLog, HyperMinHash, UltraLogLog and ExaLogLog☆23Oct 11, 2026Updated last week
- How many distinct k-mers are there in a sequence?☆11Feb 4, 2026Updated 8 months ago
- rust tool to choose the best read alignment between haploids to a diploid reference genome☆21Oct 1, 2026Updated 2 weeks ago
- Parallel Construction of Suffix Arrays in Rust☆26Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated 2 years ago
- Tools to explore Minimum Decycling Sets (MDSs) of the de Bruijn graph☆12Sep 11, 2025Updated last year
- ☆27Jun 16, 2026Updated 4 months ago
- Rust implementation of probminhash, superminhash and hyperloglog sketching algorithms☆31Jan 22, 2026Updated 8 months ago
- Rust bindings to Intelligent Storage Acceleration Library (ISA-L)☆15Feb 2, 2025Updated last year
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated 2 years ago
- Fast sequence distance estimates☆34Updated this week
- Rapid estimation of phylogenetic trees using sketching☆13Feb 18, 2025Updated last year
- Single-cache-miss rank queries over size 2 and 4 alphabets. 2x faster than all other Rust crates.☆18Apr 1, 2026Updated 6 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Fast and exact gap-affine partial order alignment☆71Sep 16, 2026Updated last month
- kmer-counter☆19Updated this week
- Viral genome coverage evaluation for metagenomic diagnostics☆27Jul 9, 2026Updated 3 months ago
- One pure-Rust binary that finds genes in phages, viruses, giant viruses, crassphages, bacteria, archaea, eukaryotes — and raw sequencing …☆36Updated this week
- Just another minhash implementation.☆13Sep 14, 2026Updated last month
- Catalogue of pairwise alignment algorithms and benchmarks☆25Jan 6, 2026Updated 9 months ago
- Fast Approximate Pattern Matching using Search Schemes☆20Jul 11, 2026Updated 3 months ago
- Clustering tool optimized for sparse distance matrices: ~16M elements with ~190M connections clustered in minutes.☆16Sep 12, 2026Updated last month
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆50Sep 30, 2026Updated 2 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python implementation of barrnap (Bacterial ribosomal RNA predictor)☆29Jun 14, 2026Updated 4 months ago
- An extensible and performant aligner and read mapper☆107Updated this week
- Fast and memory efficient partial order alignment with minipoa☆22Updated this week
- A "Navie" Implementation of the Wavefront Algorithm For Sequence Alignment with Gap-Affine Scoring☆14May 29, 2026Updated 4 months ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆47Dec 18, 2025Updated 10 months ago
- Panaln: Indexing pangenome for read alignment☆10Apr 16, 2025Updated last year
- Host depletion optimised for clinical metagenomic sequencing applications☆19Jul 9, 2026Updated 3 months ago
- Minimum plain text representation of kmer sets☆20Jan 30, 2025Updated last year
- Tearing through FASTA/Q sequences☆41Jul 9, 2026Updated 3 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Rust coder/decoder for Nucleotide Archival Format (NAF) files.☆10Jan 31, 2025Updated last year
- Short-read assembler for bacterial genomics based on a de Bruijn graph written in Rust 🦅☆16Updated this week
- LMS algorithm for computing edit distance with SIMD optimizations☆11Mar 25, 2024Updated 2 years ago
- A tool to aid virus sequencing and accelerate IRMA.☆13Oct 7, 2026Updated last week
- A SIMD-accelerated library to compute random minimizers☆49Oct 2, 2026Updated 2 weeks ago
- De novo genome assembly for long reads using an overlap graph☆25Oct 5, 2026Updated 2 weeks ago
- A repo with just adapter sequences☆14Jul 7, 2025Updated last year