steineggerlab / ufcgLinks
UFCG: Universal Fungal Core Genes
☆34Updated 4 months ago
Alternatives and similar repositories for ufcg
Users that are interested in ufcg are comparing it to the libraries listed below
Sorting:
- Discover and annotate the virome☆54Updated 2 months ago
- A workflow and scripts for large-scale antiSMASH analyses☆46Updated 8 months ago
- Unified Human Gut Virome Catalog☆38Updated last month
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆70Updated 3 weeks ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆44Updated 4 months ago
- ☆33Updated last year
- A toolkit for prokaryotic comparative genomics☆51Updated 2 months ago
- a python package for automated generation of phylogenetic trees from genbank files☆23Updated last month
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆25Updated last year
- Bacterial GWAS analysis☆46Updated last month
- A python library for predicting phage lifestyle based on genome sequence☆37Updated 2 years ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆39Updated 2 months ago
- Microbial Genome Circular plotting tool for comparative genomics using Circos☆38Updated 2 years ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆50Updated 11 months ago
- ☆32Updated 2 months ago
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- alignment-free coverage calculation for metagenomic binning >100 times faster☆48Updated 9 months ago
- ☆38Updated 2 years ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆35Updated 7 months ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆42Updated 2 years ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆26Updated last month
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆29Updated 2 years ago
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆38Updated 3 months ago
- SameStr identifies shared strains between pairs of metagenomic samples based on the similarity of SNV profiles.☆24Updated 3 weeks ago
- ☆24Updated 10 months ago
- IslandPath standalone software☆34Updated 2 years ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated 3 months ago
- Downstream processing of VAMB binning for Viral Elucidation☆52Updated last year
- A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.☆31Updated 4 months ago
- Detection of incorrectly labeled sequences across kingdoms☆86Updated 3 years ago