steineggerlab / ufcgLinks
UFCG: Universal Fungal Core Genes
☆34Updated 5 months ago
Alternatives and similar repositories for ufcg
Users that are interested in ufcg are comparing it to the libraries listed below
Sorting:
- Discover and annotate the virome☆58Updated 2 months ago
- A workflow and scripts for large-scale antiSMASH analyses☆46Updated 9 months ago
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆25Updated last year
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆70Updated last week
- Bacterial GWAS analysis☆46Updated 2 months ago
- A toolkit for prokaryotic comparative genomics☆51Updated 2 months ago
- Unified Human Gut Virome Catalog☆39Updated last month
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated 3 months ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆40Updated 3 months ago
- a python package for automated generation of phylogenetic trees from genbank files☆23Updated last month
- Rapid discovery of novel prophages using biological feature engineering and machine learning☆36Updated last year
- ☆33Updated 2 years ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆45Updated 5 months ago
- Detection of incorrectly labeled sequences across kingdoms☆87Updated 3 years ago
- Classify metagenomic contigs as eukaryotic or prokaryotic☆43Updated 2 years ago
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆35Updated 8 months ago
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆51Updated last year
- ☆22Updated 2 years ago
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆29Updated 2 years ago
- PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture☆40Updated 3 years ago
- IslandPath standalone software☆34Updated 2 years ago
- MAGScoT - a MAG scoring and refinement tool☆41Updated last year
- alignment-free coverage calculation for metagenomic binning >100 times faster☆48Updated 9 months ago
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆22Updated last year
- ☆31Updated 2 months ago
- ☆24Updated 11 months ago
- Microbial Genome Circular plotting tool for comparative genomics using Circos☆38Updated 2 years ago
- ☆81Updated last month
- Primer design from single genes to whole gene families for unlocking the tree of life☆16Updated 7 months ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆26Updated last month