☆37Feb 19, 2022Updated 4 years ago
Alternatives and similar repositories for EPACTS
Users that are interested in EPACTS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 7 months ago
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆32Jan 24, 2022Updated 4 years ago
- Multi-Omic Strategies for TWAS☆13Mar 27, 2023Updated 3 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Oct 14, 2017Updated 8 years ago
- A flexible tool for meta-analysis☆11Jul 31, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- SEEKIN: SEquence-based Estimation of KINship☆15Oct 11, 2017Updated 8 years ago
- An R script to generate plots for ADMIXTURE runs, for multiple K values.☆19Feb 27, 2025Updated last year
- R package for RIVER (RNA-Informed Variant Effect on Regulation)☆12Mar 5, 2020Updated 6 years ago
- Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves u…☆87Sep 28, 2024Updated last year
- Multiplex Primer Design☆13May 3, 2020Updated 6 years ago
- Burden testing against public controls☆51Feb 27, 2024Updated 2 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 3 years ago
- Code supporting analyses in paper on fine-mapping AD loci☆16Jun 28, 2021Updated 5 years ago
- ☆83Jun 4, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.☆170May 9, 2025Updated last year
- CWL (and input file) parser for Golang, used by github.com/otiai10/yacle☆22Mar 19, 2019Updated 7 years ago
- Fast, integrative fine mapping with functional data☆64Aug 22, 2019Updated 7 years ago
- Sequence kernel association test (SKAT)☆55Aug 7, 2025Updated last year
- ☆14Oct 26, 2017Updated 8 years ago
- Generalized linear Mixed Model Association Tests☆49Nov 21, 2025Updated 9 months ago
- Create regional association plots from GWAS or meta-analysis☆64Jan 21, 2020Updated 6 years ago
- ☆15Mar 31, 2022Updated 4 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Apr 24, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- SEQSpark documentation☆18Nov 17, 2020Updated 5 years ago
- Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)☆24Aug 21, 2026Updated last week
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆19Oct 30, 2020Updated 5 years ago
- ☆40Jan 24, 2018Updated 8 years ago
- ☆19Jul 6, 2023Updated 3 years ago
- A toolkit to calculate polygenic scores using PLINK2, PRS-CS, RapidoPGS, or PRSice2.☆16Aug 16, 2024Updated 2 years ago
- Tools to work with variant call format files☆271Jun 8, 2026Updated 2 months ago
- Multiplex Primer Design☆21Oct 30, 2020Updated 5 years ago
- Rare variant test software for next generation sequencing data☆145Jan 26, 2022Updated 4 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Info about NIH-IRP Single Cell Users Group events☆12Nov 21, 2023Updated 2 years ago
- Natural Language Search and Analysis of High Dimensional Genomic Data☆49Aug 18, 2026Updated last week
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆58Feb 17, 2022Updated 4 years ago
- principal components population genetics analysis on linux☆21Aug 29, 2021Updated 5 years ago
- ☆23Jul 25, 2023Updated 3 years ago
- Genomic Annotation in Livestock for positional candidate LOci☆14Feb 26, 2021Updated 5 years ago
- Pariwise analysis of GWAS☆48Sep 27, 2018Updated 7 years ago