Jeremy37 / AD_finemapLinks
Code supporting analyses in paper on fine-mapping AD loci
☆16Updated 4 years ago
Alternatives and similar repositories for AD_finemap
Users that are interested in AD_finemap are comparing it to the libraries listed below
Sorting:
- Regional association plots☆25Updated last year
- ☆24Updated 4 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆34Updated 5 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆30Updated last week
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆42Updated 7 years ago
- GENI plots to visualise results from genome-wide association studies☆30Updated last year
- Colocalization analysis of genetic association signals☆53Updated 5 months ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated last year
- Create Regional Association Plots☆12Updated 2 months ago
- ☆21Updated 3 months ago
- Software for estimating correlation of trait effect sizes across populations☆50Updated 5 months ago
- ☆37Updated 4 years ago
- Make LocusZoom-like plots with your own LD matrix.☆47Updated 3 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆47Updated 2 years ago
- ☆35Updated 2 years ago
- Genetics ToolboX R package☆32Updated 5 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Updated 5 months ago
- Create LocusZoom-style plots in R.☆22Updated 2 years ago
- Mediated Expression Score Regression (MESC)☆26Updated 2 weeks ago
- GWAS for survival analysis in large cohorts☆22Updated last year
- A collection of various utilities for GWAS summary statistics☆32Updated last year
- Estimate genetic correlation using predicted expression☆23Updated 7 years ago
- ☆23Updated 3 months ago
- ☆13Updated 3 years ago
- SCALLOP-INF analysis☆20Updated 3 weeks ago
- Regional association plots☆26Updated last year
- Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.☆41Updated 2 years ago
- A principled framework to estimate annotation-stratified genetic covariance using GWAS summary statistics.☆31Updated last year
- ☆18Updated 7 years ago
- S-LDSC scripts for use on MR server.☆10Updated 4 years ago