bystrogenomics / bystroLinks
Natural Language Search and Analysis of High Dimensional Genomic Data
☆48Updated 2 months ago
Alternatives and similar repositories for bystro
Users that are interested in bystro are comparing it to the libraries listed below
Sorting:
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- Website to analyze conflicting assertions in ClinVar☆19Updated last year
- Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each alle…☆45Updated 3 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data☆38Updated last month
- fast webservices based query tool for large sets of genomic features☆25Updated 5 months ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆28Updated 2 years ago
- VCF-Miner: A graphical user interface for sorting, filtering and querying annotated VCF Files☆37Updated 5 years ago
- VVP (VAAST Variant Prioritizer) rapidly prioritizes genetic variants☆19Updated 7 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 7 months ago
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).☆30Updated 8 years ago
- Fast fusion detection using kallisto☆79Updated 4 months ago
- chimeraviz is an R package that automates the creation of chimeric RNA visualizations.☆38Updated last year
- Code associated with 2019 manuscript entitled "Transcript expression-aware annotation improves rare variant discovery and interpretation…☆33Updated 3 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Updated 5 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- Multi-sample somatic variant caller☆52Updated 3 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆35Updated 8 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 5 years ago
- ☆69Updated 3 years ago
- Keep Me Around: Intron Retention Detection☆29Updated 6 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆53Updated this week
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆30Updated 3 years ago
- Generic human DNA variant annotation pipeline☆58Updated last year