statgen / locuszoom-standaloneLinks
Create regional association plots from GWAS or meta-analysis
☆61Updated 5 years ago
Alternatives and similar repositories for locuszoom-standalone
Users that are interested in locuszoom-standalone are comparing it to the libraries listed below
Sorting:
- ☆40Updated 7 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆71Updated last year
- Enhanced version of the FastQTL QTL mapper☆67Updated 2 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆40Updated 7 months ago
- Read PLINK BED/BIM/FAM files into R☆41Updated 4 years ago
- ☆60Updated 3 years ago
- Functional genomics and genome-wide association studies☆67Updated 7 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆89Updated 4 months ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- Fuji plot—a circos representation of multiple GWAS results—☆88Updated 2 months ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- Tutorials covering various topics in genomic data analysis.☆17Updated 6 years ago
- ☆38Updated 4 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- ☆26Updated 2 months ago
- ☆33Updated 3 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆50Updated 3 weeks ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆29Updated 4 months ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Updated 4 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆84Updated last year
- Genomic Association Tester☆31Updated 2 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated last week
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- a set of NGS pipelines☆24Updated last week
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆59Updated 5 years ago
- An R interface to the MEME Suite☆52Updated last month
- R package containing useful functions for mutational signature analysis☆83Updated this week