statgen / locuszoom-standaloneLinks
Create regional association plots from GWAS or meta-analysis
☆61Updated 5 years ago
Alternatives and similar repositories for locuszoom-standalone
Users that are interested in locuszoom-standalone are comparing it to the libraries listed below
Sorting:
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- Enhanced version of the FastQTL QTL mapper☆71Updated 2 years ago
- ☆63Updated 3 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- Fuji plot—a circos representation of multiple GWAS results—☆92Updated 6 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72Updated last year
- Read PLINK BED/BIM/FAM files into R☆41Updated 4 years ago
- ☆40Updated 7 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆43Updated 11 months ago
- ☆38Updated 4 years ago
- Functional genomics and genome-wide association studies☆69Updated 7 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆54Updated last month
- Genomic Association Tester☆34Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆37Updated 2 years ago
- ☆72Updated 2 years ago
- SPP - R package for analysis of ChIP-seq and other functional sequencing data☆43Updated 4 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆56Updated 2 months ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated this week
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated 2 years ago
- ☆46Updated 5 months ago
- Fast, integrative fine mapping with functional data☆61Updated 6 years ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆35Updated 7 years ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 2 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 8 years ago
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year