Multiplex Primer Design
☆22Oct 30, 2020Updated 5 years ago
Alternatives and similar repositories for mpd-c
Users that are interested in mpd-c are comparing it to the libraries listed below
Sorting:
- Multiplex Primer Design☆12May 3, 2020Updated 5 years ago
- Retrieve sequences flanked by an arbitrary number of primers from a nucleotide collection.☆11Jun 11, 2021Updated 4 years ago
- PCR Primer Quality Control☆71Sep 29, 2025Updated 5 months ago
- A tool to design highly specific PCR primers for the validation of genomic alterations including structural variants☆47May 21, 2017Updated 8 years ago
- SARS-CoV-2 analysis pipeline for multiplex-PCR MPS(Massive Parrallel Sequencing) data☆20Jan 24, 2022Updated 4 years ago
- ☆10Jul 13, 2022Updated 3 years ago
- ☆12Aug 6, 2025Updated 6 months ago
- Package to design primers for MutaSeq and related methods☆11Jan 15, 2021Updated 5 years ago
- A detailed guide to analise and integrate small-RNASeq and RNASeq samples using miARma-Seq☆11Oct 16, 2019Updated 6 years ago
- A fork of the project Excavator2 from sourceforge.☆10Jun 29, 2017Updated 8 years ago
- File parsing and writing code for Ensembl☆10Jan 7, 2026Updated last month
- Maximum likelihood demultiplexing☆51Feb 14, 2025Updated last year
- CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data☆12Nov 9, 2025Updated 3 months ago
- Extremely fast Variant Call Format annotation☆11Dec 25, 2024Updated last year
- Genomic Visualization Catalog☆13Oct 6, 2022Updated 3 years ago
- the we-flyin WFA-guided ultralong tiling sequence aligner☆10May 13, 2021Updated 4 years ago
- NeXML is an exchange standard for representing phyloinformatic data.☆15Feb 23, 2017Updated 9 years ago
- CircSplice☆12Feb 27, 2019Updated 7 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆31May 23, 2024Updated last year
- Gene copy number prediction from k-mer frequencies☆15Jul 29, 2024Updated last year
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆30Jan 24, 2022Updated 4 years ago
- R htmlwidget package for ideogram.js☆15Oct 26, 2022Updated 3 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Jun 1, 2022Updated 3 years ago
- A RepSeq processing swiss-knife☆41Mar 29, 2024Updated last year
- An R Package for Multiplex PCR Primer Design and Analysis☆30Jul 12, 2025Updated 7 months ago
- ☆13Jan 23, 2020Updated 6 years ago
- A toolset for handling sequencing data with unique molecular identifiers (UMIs)☆17Jul 13, 2018Updated 7 years ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Aug 10, 2018Updated 7 years ago
- SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity☆13Aug 14, 2023Updated 2 years ago
- ☆13Mar 11, 2019Updated 6 years ago
- Computation of average nucleotide identity with the use of MMseqs2☆15Dec 11, 2024Updated last year
- ☆34Apr 25, 2022Updated 3 years ago
- Multiplex PCR design, in silico☆19Mar 4, 2025Updated 11 months ago
- Perl and Python scripts allowing to get sequence information from GenBank, RefSeq or ENA sequence repositories☆14Mar 29, 2025Updated 11 months ago
- WALT is a read mapping program for bisulfite sequencing DNA methylation studies.☆17Aug 23, 2022Updated 3 years ago
- A Mendelian approach to variant effect prediction built in keras☆20Nov 3, 2025Updated 4 months ago
- A toolkit to design standard primers, multiplexed primers, and primers around SV's☆13Oct 29, 2022Updated 3 years ago
- An automatic classification tool for PVS1 interpretation of null variants☆44Mar 4, 2024Updated 2 years ago
- CAVA (Clinical Annotation of VAriants)☆14Sep 28, 2018Updated 7 years ago