wingolab-org / mpd-cLinks
Multiplex Primer Design
☆21Updated 4 years ago
Alternatives and similar repositories for mpd-c
Users that are interested in mpd-c are comparing it to the libraries listed below
Sorting:
- Multiplex Primer Design☆12Updated 5 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 7 years ago
- Adapters for trimming☆30Updated 6 years ago
- Long read to rMATS☆31Updated 2 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆28Updated 3 years ago
- ☆24Updated 10 months ago
- Clin-mNGS: Automated pipeline for pathogen detection from clinical metagenomic data☆18Updated 4 years ago
- SiNVICT: Ultra-Sensitive Detection of Single Nucleotide Variants and Indels in Circulating Tumour DNA☆27Updated 4 years ago
- Automated human exome/genome variants detection from FASTQ files☆22Updated 3 years ago
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆37Updated 3 years ago
- Reproducibility workflow for Gigante et al., 2018: Using long-read sequencing to detect imprinted DNA methylation☆23Updated 6 years ago
- fastx-utils using klib☆18Updated 4 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆20Updated 7 years ago
- Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.☆23Updated 9 years ago
- Version II of Mandalorion☆32Updated 6 years ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- Filters for false-positive mutation calls in NGS☆30Updated 6 years ago
- ☆14Updated 7 years ago
- Tools for processing and analyzing structural variants.☆33Updated 9 years ago
- ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to ama …☆21Updated 2 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated last year
- High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants☆22Updated 5 years ago
- R package for inferring copy number from read depth☆32Updated 2 years ago
- Detection of Circular RNA and Fusions from RNA-Seq☆32Updated 6 years ago
- curPrimers is a tool for trimming primer sequences from amplicon based NGS reads☆16Updated last month
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 3 months ago
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆21Updated 8 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago