Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)
☆24Sep 26, 2025Updated 5 months ago
Alternatives and similar repositories for RAINBOWR
Users that are interested in RAINBOWR are comparing it to the libraries listed below
Sorting:
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆18Mar 18, 2025Updated 11 months ago
- https://filippob.github.io/introduction_to_gwas/☆22Jul 2, 2025Updated 8 months ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated last month
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- Genome-wide association studies (GWAS) for ordered categorical phenotypes☆23Updated this week
- MODAS: Multi-Omics Data Association Study toolkit☆21Nov 21, 2024Updated last year
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆12Sep 3, 2024Updated last year
- ☆11Dec 15, 2025Updated 2 months ago
- Fast manhattenplots using ggplot2☆13Feb 19, 2024Updated 2 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- GWAS SNP Regulatory Analysis Tool☆17Mar 19, 2015Updated 10 years ago
- ☆12Jun 16, 2023Updated 2 years ago
- the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics☆17Aug 25, 2022Updated 3 years ago
- ☆15Mar 7, 2025Updated 11 months ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆13Mar 14, 2019Updated 6 years ago
- Python script for multivariate GWAS meta-analysis☆24Dec 6, 2024Updated last year
- Example for TWAS☆12Jan 23, 2022Updated 4 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆16Feb 9, 2026Updated 3 weeks ago
- ☆18Oct 4, 2023Updated 2 years ago
- A haplotype analysis toolkit for natural variation study.☆31Oct 3, 2023Updated 2 years ago
- A collection of various utilities for GWAS summary statistics☆32May 14, 2024Updated last year
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆20Aug 13, 2025Updated 6 months ago
- SCALLOP-INF analysis☆20Oct 24, 2025Updated 4 months ago
- R package 📦 for handy functions when working with GWAS (summary) data☆17Jul 29, 2019Updated 6 years ago
- Genomic Annotation in Livestock for positional candidate LOci☆13Feb 26, 2021Updated 5 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- Repository☆10Oct 23, 2024Updated last year
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- ☆24Nov 9, 2017Updated 8 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆21Aug 19, 2025Updated 6 months ago
- ☆18Dec 15, 2021Updated 4 years ago
- ☆21Nov 15, 2024Updated last year
- ☆23Oct 30, 2022Updated 3 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Oct 14, 2017Updated 8 years ago
- Quality control steps for GWAS☆26Aug 11, 2023Updated 2 years ago