chaolongwang / SEEKINLinks
SEEKIN: SEquence-based Estimation of KINship
☆14Updated 7 years ago
Alternatives and similar repositories for SEEKIN
Users that are interested in SEEKIN are comparing it to the libraries listed below
Sorting:
- Tao Yan's Plot Toolkit☆12Updated 6 years ago
- Reducing reference bias using multiple population reference genomes☆32Updated last year
- Exhaustive capture of biological variation in RNA-seq data through k-mer decomposition.☆15Updated 6 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Updated 3 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 5 months ago
- Tools for merging Tandem Repeat VCF files☆33Updated 4 months ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆23Updated 4 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 3 weeks ago
- seqcover allows users to view coverage for hundreds of genes and dozens of samples☆52Updated 4 years ago
- Ultra Fast NGS Data QC Tool☆27Updated 4 years ago
- Expectation-Maximization algorithm for Allele-Specific Expression☆21Updated 2 years ago
- v2.x of the microassembly based somatic variant caller☆23Updated last month
- SNP genotyping in polyploids☆17Updated 5 years ago
- Unfazed by genomic variant phasing☆27Updated last year
- Experimental EIGENSOFT performance improvements.☆21Updated 10 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- SAMsift: advanced filtering and tagging of SAM/BAM alignments using Python expressions.☆23Updated 7 years ago
- Bam Read Index - Extract alignments from a bam file by readname☆27Updated last year
- CADD-SV – a framework to score the effect of structural variants☆14Updated 5 months ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- EM-PCA for Ultra-low Coverage Sequencing Data☆18Updated 7 months ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 3 months ago
- Integrative analysis of structural variations.☆40Updated last year
- ☆11Updated 2 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 7 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- Module for analysing admixture graphs☆28Updated 7 years ago
- QUILT: Low coverage whole genome sequence imputation with large reference panels☆65Updated last month