genepi / imputationserver
Michigan Imputation Server: A new web-based service for imputation that facilitates access to new reference panels and greatly improves user experience and productivity
☆80Updated 6 months ago
Alternatives and similar repositories for imputationserver:
Users that are interested in imputationserver are comparing it to the libraries listed below
- MOsaic CHromosomal Alterations (MoChA) caller☆84Updated last month
- ☆40Updated 7 years ago
- Rare variant test software for next generation sequencing data☆138Updated 3 years ago
- Burden testing against public controls☆50Updated last year
- ☆65Updated last year
- Provides helper scripts for inferring local ancestry, performing ancestry-specific PCA, etc☆108Updated 3 years ago
- Segmented HAPlotype Estimation and Imputation Tool☆76Updated 7 months ago
- Haplotype phasing software☆65Updated 4 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- Tools to work with GWAS-VCF summary statistics files☆116Updated 6 months ago
- Main ricopili repo for public releases☆46Updated 3 weeks ago
- Development for SAIGE and SAIGE-GENE(+)☆72Updated last week
- Applying polygenic scores (PGS) on imputed genotypes☆28Updated 9 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆51Updated last year
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆78Updated 4 months ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 5 months ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆63Updated last week
- Sanity check Variant Call Format (VCF) files.☆37Updated 9 years ago
- ☆97Updated 2 years ago
- Data and information about the Polaris study☆53Updated 5 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆32Updated 5 years ago
- This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…☆52Updated 4 years ago
- Scripts for GWAS association and metaanalysis☆43Updated 4 years ago
- Battenberg R package for subclonal copynumber estimation☆86Updated this week
- Sequence kernel association test (SKAT)☆46Updated last month
- ☆69Updated this week
- Minimac3 is a low memory and computationally efficient implementation of the genotype imputation algorithms. Minimac3 is designed to hand…☆29Updated 3 years ago
- R package designed to simplify structural variant analysis☆72Updated 3 years ago
- Battenberg algorithm and associated implementation script☆52Updated 4 years ago
- Relevant papers for CNV and SV approaches☆94Updated 4 months ago