Alternatives and similar repositories for locuszoom:

Users that are interested in locuszoom are comparing it to the libraries listed below

• davidaknowles / leafcutter
  Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae …
  ☆212Updated 9 months ago
• secastel / phaser
  phasing and Allele Specific Expression from RNA-seq
  ☆112Updated 8 months ago
• cbg-ethz / NGS-pipe
  NGS-pipe: next-generation sequencing pipelines for precision oncology
  ☆109Updated 6 years ago
• ndaniel / fusioncatcher
  Finder of Somatic Fusion Genes in RNA-seq data
  ☆145Updated last year
• konradjk / loftee
  ☆174Updated last year
• bioinform / somaticseq
  An ensemble approach to accurately detect somatic mutations using SomaticSeq
  ☆197Updated this week
• lima1 / PureCN
  Copy number calling and variant classification using targeted short read sequencing
  ☆132Updated this week
• broadinstitute / gtex-viz
  GTEx Visualizations
  ☆64Updated 3 years ago
• parklab / NGSCheckMate
  Software program for checking sample matching for NGS data
  ☆129Updated 9 months ago
• bli25 / RSEM_tutorial
  A short tutorial on how to use RSEM
  ☆136Updated 4 years ago
• h3abionet / h3agwas
  GWAS Pipeline for H3Africa
  ☆108Updated this week
• freeseek / gtc2vcf
  Tools to convert Illumina IDAT/BPM/EGT/GTC and Affymetrix CEL/CHP files to VCF
  ☆146Updated last month
• FRED-2 / OptiType
  Precision HLA typing from next-generation sequencing data
  ☆196Updated last year
• statgen / pheweb
  A tool to build a website to browse hundreds or thousands of GWAS.
  ☆169Updated 7 months ago
• suhrig / arriba
  Fast and accurate gene fusion detection from RNA-Seq data
  ☆235Updated last week
• brentp / vcfanno
  annotate a VCF with other VCFs/BEDs/tabixed files
  ☆371Updated last year
• walaj / svaba
  Structural variation and indel detection by local assembly
  ☆244Updated last week
• Zhong-Lab-UCSD / Genomic-Interactive-Visualization-Engine
  Genomic Interactive Visualization Engine
  ☆145Updated 2 years ago
• igordot / genomics
  A collection of scripts and notes related to genomics and bioinformatics
  ☆207Updated last month
• dkoboldt / varscan
  Variant calling and somatic mutation/CNV detection for next-generation sequencing data
  ☆156Updated last year
• zhxiaokang / RASflow
  RNA-Seq analysis workflow
  ☆104Updated 3 years ago
• broadinstitute / gnomad_methods
  Hail helper functions for the gnomAD project and Translational Genomics Group
  ☆93Updated this week
• OpenGene / GeneFuse
  Gene fusion detection and visualization
  ☆122Updated 3 years ago
• ewels / AWS-iGenomes
  Documentation and description of AWS iGenomes S3 resource.
  ☆111Updated 3 months ago
• ENCODE-DCC / chip-seq-pipeline
  ENCODE Uniform processing pipeline for ChIP-seq
  ☆123Updated 5 years ago
• EGA-archive / ega-download-client
  A Python-based EGA download client
  ☆98Updated 6 months ago
• raerose01 / deconstructSigs
  deconstructSigs
  ☆140Updated last year
• gpertea / gffcompare
  classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF
  ☆212Updated 8 months ago
• zwdzwd / transvar
  TransVar - multiway annotator for precision medicine
  ☆124Updated last year
• ENCODE-DCC / rna-seq-pipeline
  ☆147Updated 2 years ago