freeseek / gwaspipeline
☆40Updated 7 years ago
Alternatives and similar repositories for gwaspipeline:
Users that are interested in gwaspipeline are comparing it to the libraries listed below
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 5 years ago
- ☆25Updated 11 months ago
- A tool to plot significant regions of GWAS☆29Updated 2 years ago
- Burden testing against public controls☆50Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Enhanced version of the FastQTL QTL mapper☆64Updated 2 years ago
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- Read PLINK BED/BIM/FAM files into R☆40Updated 3 years ago
- Functional genomics and genome-wide association studies☆67Updated 6 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆29Updated 5 months ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 5 months ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated last month
- software package for integrative genetic association analysis☆34Updated last year
- ☆41Updated 7 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆53Updated last year
- Fast, integrative fine mapping with functional data☆57Updated 5 years ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- Liftover VCF files☆18Updated 8 years ago
- GTEx analysis scripts☆20Updated 8 years ago
- ☆24Updated 5 months ago
- Scripts to run mQTL analyses as described in the ARIES mQTL paper☆9Updated 9 years ago
- ☆26Updated 4 years ago
- Main ricopili repo for public releases☆47Updated 3 weeks ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆47Updated 3 weeks ago
- Sequence kernel association test (SKAT)☆49Updated 2 months ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- Generalized linear Mixed Model Association Tests☆42Updated last year
- Colocalization analysis of genetic association signals☆52Updated 5 months ago
- Cross-population fine-mapping☆35Updated 4 months ago