freeseek / gwaspipelineLinks
☆40Updated 7 years ago
Alternatives and similar repositories for gwaspipeline
Users that are interested in gwaspipeline are comparing it to the libraries listed below
Sorting:
- ☆26Updated last month
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 6 years ago
- Enhanced version of the FastQTL QTL mapper☆67Updated 2 years ago
- A tool to plot significant regions of GWAS☆30Updated 2 years ago
- Burden testing against public controls☆50Updated last year
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆52Updated 6 years ago
- ☆60Updated 3 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- Functional genomics and genome-wide association studies☆67Updated 6 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆49Updated 3 weeks ago
- Sequence kernel association test (SKAT)☆50Updated 5 months ago
- RFMIX - Local Ancestry and Admixture Inference Version 2☆88Updated 2 years ago
- Cross-population fine-mapping☆37Updated 7 months ago
- Canonical SGE cluster genotype imputation pipeline☆12Updated 9 years ago
- Development for SAIGE and SAIGE-GENE(+)☆77Updated this week
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆53Updated last month
- Genomic Association Tester☆31Updated 2 years ago
- ☆24Updated 7 months ago
- ☆19Updated 2 years ago
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- A complete tool set for molecular QTL discovery and analysis☆55Updated last year
- Fast, integrative fine mapping with functional data☆59Updated 5 years ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated last year
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆40Updated 7 months ago
- Main ricopili repo for public releases☆48Updated 3 months ago
- Fork of ricopili for development of pipeline for family-based data☆18Updated 3 weeks ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆65Updated 3 months ago
- R package designed to simplify structural variant analysis☆73Updated 3 years ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated 7 months ago
- Create mutation signatures from MAF's, and decompose them into Stratton signatures☆60Updated 6 years ago