Topology weighting by iterative sampling of sub-trees
☆89Jan 5, 2025Updated last year
Alternatives and similar repositories for twisst
Users that are interested in twisst are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Quantifying Introgression via Branch Lengths☆58Sep 30, 2022Updated 3 years ago
- Tutorials on evolutionary genomics☆47Mar 11, 2022Updated 4 years ago
- General tools for genomic analyses.☆393Mar 25, 2026Updated 4 months ago
- Topology weighting from unphased genotypes of any ploidy☆29Jun 17, 2026Updated last month
- Hybridization detection using phylogenetic invariants☆53Oct 29, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- SMC++ infers population history from whole-genome sequence data.☆177Jan 20, 2024Updated 2 years ago
- Ancestry_HMM-S is program designed to infer adaptive introgression from population genomic data☆20Sep 25, 2023Updated 2 years ago
- Scripts for Wang et al (2020) Evidence for widespread selection in shaping the genomic landscape during speciation of Populus.☆11Feb 15, 2020Updated 6 years ago
- Code for computing various support scores for internodes☆19Apr 7, 2020Updated 6 years ago
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆192Dec 19, 2024Updated last year
- ☆48Sep 5, 2023Updated 2 years ago
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Mar 19, 2026Updated 4 months ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆48Mar 7, 2024Updated 2 years ago
- Effective selection of population size projection for construction of the site frequency spectrum. Convert VCF to dadi/fastsimcoal style …☆177Apr 17, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Genome-wide scan for balancing selection using beta statistic☆32Apr 26, 2023Updated 3 years ago
- ☆16Jan 6, 2022Updated 4 years ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- Software package for estimating fine-scale recombination rate.☆19Jun 8, 2021Updated 5 years ago
- DFOIL: Introgression Testing for Five Taxa☆33May 15, 2021Updated 5 years ago
- Accurate Species Tree EstimatoR: a family of optimation algorithms for species tree inference (including ASTRAL & CASTER)☆254Jun 25, 2026Updated last month
- ☆24Mar 17, 2026Updated 4 months ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Sep 13, 2019Updated 6 years ago
- A collection of tools useful for preparing or manipulating site-frequency spectrum (SFS) files☆21Mar 20, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PhyloNetworks: a julia package with utilities for phylogenetic networks☆175Jul 2, 2026Updated 3 weeks ago
- Inferring natural selection by comparative population genomic analysis across species☆27Oct 31, 2023Updated 2 years ago
- ☆27Apr 14, 2021Updated 5 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆43Nov 15, 2023Updated 2 years ago
- Selection outlier scan with population branch statistic☆15Feb 21, 2024Updated 2 years ago
- Software for painlessly estimating average nucleotide diversity within and between populations☆167Updated this week
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆67Apr 25, 2024Updated 2 years ago
- ☆22Jun 11, 2026Updated last month
- R package for analysis of hybrids and hybrid zones☆21Dec 30, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Genetic Algorithm for Demographic Model Analysis☆57Feb 3, 2026Updated 5 months ago
- Tutorials on phylogenetic and phylogenomic inference☆402Apr 12, 2026Updated 3 months ago
- Program for analysing NGS data.☆263Mar 6, 2025Updated last year
- Bayesian analysis of genomic sequence data under the multispecies coalescent model☆114Updated this week
- ☆14Mar 18, 2025Updated last year
- Assessing confidence in introgression among four populations☆29Apr 19, 2021Updated 5 years ago
- ☆12Sep 6, 2019Updated 6 years ago