LauritsSkov / Introgression-detectionLinks
☆43Updated 3 months ago
Alternatives and similar repositories for Introgression-detection
Users that are interested in Introgression-detection are comparing it to the libraries listed below
Sorting:
- Likelihood-based Selective Sweep Detection☆40Updated last year
- Infer demographic history with the Moran model☆48Updated 3 months ago
- Tools and Utilities for msmc and msmc2☆48Updated last month
- predicting DFE and alpha from polymorphism data☆28Updated 6 years ago
- RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors☆36Updated last year
- Graph-aware Retrieval of Selective Sweeps☆22Updated last year
- Ancestry_HMM-S is program designed to infer adaptive introgression from population genomic data☆19Updated last year
- ☆26Updated 7 months ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- Convergent substitution detection tool based on the PCOC model☆31Updated 3 years ago
- Computational Analysis of Gene Expression Evolution☆43Updated 3 weeks ago
- General purpose population genetics software☆15Updated 6 years ago
- ☆32Updated 4 years ago
- ☆52Updated 3 months ago
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Updated 6 months ago
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 7 months ago
- GitHub repository for GenErode, a Snakemake workflow for the analysis of whole-genome sequencing data from historical and modern samples …☆27Updated last month
- Sampling and inference of genealogies with recombination☆39Updated 2 months ago
- Chromosome-level synteny plotting using orthologous regions☆29Updated last year
- ☆13Updated 4 years ago
- ☆25Updated last year
- calling SVs from Blasr contig level alignments☆54Updated 7 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- Multi-genome synteny block visualization tool☆44Updated 7 months ago
- ☆42Updated last year
- Assessing confidence in introgression among four populations☆27Updated 4 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 7 years ago
- ☆24Updated 8 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆32Updated 5 months ago