satijalab / azimuth-referencesLinks
☆24Updated 2 months ago
Alternatives and similar repositories for azimuth-references
Users that are interested in azimuth-references are comparing it to the libraries listed below
Sorting:
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆39Updated 3 years ago
- ☆29Updated 2 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆41Updated 3 years ago
- ☆35Updated 4 months ago
- Single-cell Case Control Analysis☆51Updated 8 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 9 months ago
- Single-Cell Sequencing Quality Control and Processing Software☆30Updated 5 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- ☆41Updated 4 years ago
- R package for Bioconductor submission☆35Updated 2 years ago
- Heterogeneity Induced Pre-Processing tOol☆18Updated 3 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆22Updated 11 months ago
- Normalize CITEseq Data☆66Updated 3 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated this week
- ☆55Updated 4 years ago
- An R-based interface for loom files☆66Updated 5 years ago
- Clone identification from single-cell data☆61Updated 2 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆20Updated 2 years ago
- An R package designed to demultiplex cell hashing data☆31Updated 3 weeks ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- Cluster Identity Predictor (R package implementation)☆20Updated 3 years ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- An R toolkit for estimation of cell composition from bulk expression data☆75Updated last month
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 months ago