MarioniLab / BarcodeSwapping2017Links
Supplementary files for paper "Detection and removal of barcode swapping in single-cell RNAseq".
☆11Updated 7 years ago
Alternatives and similar repositories for BarcodeSwapping2017
Users that are interested in BarcodeSwapping2017 are comparing it to the libraries listed below
Sorting:
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 8 years ago
- Exon-Intron Split Analysis (EISA) in R☆17Updated last month
- Genomic trajectories (pseudotimes) in the presence of heterogenous environmental and genetic backgrounds☆11Updated 6 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- scover☆24Updated 2 years ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆13Updated 2 years ago
- Inference of switch-like differential expression along single-cell trajectories☆21Updated 8 years ago
- ☆14Updated 6 years ago
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 4 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- ☆21Updated 8 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- Beta-Poisson model for single-cell RNA-seq data analyses☆16Updated 6 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 weeks ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆30Updated 4 years ago
- ☆17Updated last year
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 6 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Introduction to single cell RNAseq data analysis and interpretation course work provided by Harvard Informatics Team.☆16Updated 7 years ago
- Haystack: Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆46Updated 3 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- Bead-based single-cell atac processing☆33Updated 4 years ago
- ☆28Updated 6 years ago