Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.
☆15Mar 3, 2026Updated 2 months ago
Alternatives and similar repositories for scLANE
Users that are interested in scLANE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Comparison, benchmarking & QC of epigenetic datasets☆17Dec 2, 2025Updated 5 months ago
- ☆26May 16, 2025Updated 11 months ago
- ☆12Nov 19, 2023Updated 2 years ago
- Code for producing the analysis in the "Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq" manuscr…☆16Feb 5, 2020Updated 6 years ago
- Estimation of Single-Cell Potency with Single Cell Entropy☆46Apr 12, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- General, open-standard schema for cell annotations☆16Jun 16, 2025Updated 10 months ago
- ☆12Jun 28, 2024Updated last year
- SCISSORS builds upon the Louvain graph-based clustering in Seurat by optimizing parameter selection when reclustering cell groups, with a…☆14Mar 26, 2026Updated last month
- Toolkit for Single-Cell Velocity☆60Apr 17, 2026Updated 3 weeks ago
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- ☆16Sep 1, 2023Updated 2 years ago
- ☆34May 1, 2026Updated last week
- ☆10Jan 29, 2020Updated 6 years ago
- A clustering algorithm that can perform internal validation inspired by forest fire dynamics and self-organized criticality☆18May 18, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆20May 30, 2022Updated 3 years ago
- WALT is a read mapping program for bisulfite sequencing DNA methylation studies.☆17Aug 23, 2022Updated 3 years ago
- A Hanyu Pinyin font derived from Lato.☆16Jan 15, 2021Updated 5 years ago
- Fit Gamma-Poisson Generalized Linear Models Reliably☆122Mar 17, 2025Updated last year
- ☆22Sep 1, 2022Updated 3 years ago
- The Visualization of Protein-Ligand Graphs software that powers the PTGL☆16Apr 4, 2024Updated 2 years ago
- A R package for advanced single cell data viz☆74Aug 29, 2025Updated 8 months ago
- Cluster Identity Predictor (R package implementation)☆21Mar 8, 2022Updated 4 years ago
- Exploiting SNP correlations within Random Forest for Genome-Wide Association Studies☆13Oct 20, 2014Updated 11 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- UniTVelo, Temporally Unified RNA Velocity for single cell trajectory inference☆27Nov 12, 2024Updated last year
- A segmentation approach to analyze DNA methylation patterns and identify differentially methylation regions from whole-genome datasets☆21Feb 16, 2026Updated 2 months ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆20Mar 28, 2026Updated last month
- ☆10Jan 17, 2023Updated 3 years ago
- ☆13Mar 20, 2021Updated 5 years ago
- Package for biomedical data model and metadata ingress management☆28Apr 4, 2026Updated last month
- This is a read-only mirror of the CRAN R package repository. Matrix — Sparse and Dense Matrix Classes and Methods. Homepage: https://Ma…☆22Mar 21, 2026Updated last month
- An R package designed to demultiplex cell hashing data☆31Apr 10, 2026Updated 3 weeks ago
- Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data☆152Feb 13, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Project and coding tools for the Center for Innovative Design and Analysis (CIDA)☆10Apr 29, 2026Updated last week
- UniCell Deconvolve - Cloud Cell Type Deconvolution For Transcriptomic Data☆27Jul 26, 2023Updated 2 years ago
- Cell-type Relationship Analysis Workflow Done Across Distances☆41Nov 18, 2025Updated 5 months ago
- A Binary Tree Visualizer implemented purely in C - A combination of Data Structures & Computer Graphics.☆14Mar 30, 2021Updated 5 years ago
- ☆11May 24, 2024Updated last year
- ☆12Oct 19, 2024Updated last year
- This is an R package to retrieve data from Open Target☆15Jul 25, 2025Updated 9 months ago