lcrawlab / callbackLinks
Calibrated clustering via knockoffs for single-cell genomics
☆10Updated 6 months ago
Alternatives and similar repositories for callback
Users that are interested in callback are comparing it to the libraries listed below
Sorting:
- Gene-level general linear mixed model☆22Updated 7 months ago
- ☆25Updated 2 months ago
- Core utilities for single-cell RNA-seq☆12Updated 4 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- R package for benchmarking single cell analysis methods☆32Updated last year
- Toolbox package for organizing and working with TCGA data☆28Updated last month
- 🐶 hlabud: HLA genotype analysis in R☆16Updated 4 months ago
- A set of tools for accurate quantitation of single-cell allele-specific expression☆12Updated 2 years ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆13Updated 8 months ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 5 years ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Compute the neighborhood consolidation matrix and identify SHRs☆13Updated 2 months ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Explore the cancer relevance of your gene list☆51Updated 6 months ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- An R package for visualising cell-cell interactions☆44Updated last year
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated last month
- ☆11Updated last year
- Prioritizing Cancer Driver Genes Using Genomics Data☆17Updated 2 years ago
- ☆62Updated 5 months ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Differential Correlation across Ranked Samples☆12Updated 2 years ago
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago
- This R package for performing module repertoire analyses and generating fingerprint representations☆16Updated 3 years ago
- ☆14Updated 6 years ago
- Cancer Dependency Map package☆30Updated last year