lcrawlab / callbackLinks
Calibrated clustering via knockoffs for single-cell genomics
☆10Updated 9 months ago
Alternatives and similar repositories for callback
Users that are interested in callback are comparing it to the libraries listed below
Sorting:
- Gene-level general linear mixed model☆23Updated last month
- ☆25Updated 5 months ago
- 🐶 hlabud: HLA genotype analysis in R☆17Updated 7 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆29Updated 2 years ago
- Trans-association between HLA and TCR-CDR3☆18Updated 2 years ago
- GEO RNA-seq Experiments Processing Pipeline☆21Updated 6 years ago
- An R package for multi-dimensional pathway enrichment analysis☆16Updated 7 months ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- ☆16Updated 8 months ago
- CellAnn☆12Updated 2 years ago
- Core utilities for single-cell RNA-seq☆12Updated 7 months ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆17Updated last year
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Updated 2 years ago
- Compute the neighborhood consolidation matrix and identify SHRs☆13Updated 5 months ago
- Toolbox package for organizing and working with TCGA data☆28Updated last week
- Differential Expression with Capture Efficiency adjustmeNT☆14Updated 2 years ago
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆14Updated 11 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Updated 5 years ago
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 7 months ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 6 months ago
- Explore the cancer relevance of your gene list☆52Updated 2 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 3 years ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Updated 6 years ago
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- distinct: a method for differential analyses via hierarchical permutation tests☆11Updated last year
- This R package for performing module repertoire analyses and generating fingerprint representations☆16Updated 4 years ago