Community-provided extensions to Seurat
☆366Jun 29, 2026Updated last week
Alternatives and similar repositories for seurat-wrappers
Users that are interested in seurat-wrappers are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package for detecting doublets in single-cell RNA sequencing data☆554Mar 21, 2025Updated last year
- ☆459May 26, 2026Updated last month
- Dataset distribution for Seurat☆156Mar 6, 2025Updated last year
- NicheNet: predict active ligand-target links between interacting cells☆664Jun 1, 2026Updated last month
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆303Jun 30, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- R toolkit for single cell genomics☆2,762Jun 26, 2026Updated last week
- Functions for identifying and characterizing continuous developmental trajectories in single-cell data.☆340Apr 23, 2024Updated 2 years ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data☆792Jan 6, 2024Updated 2 years ago
- Fast, sensitive and accurate integration of single-cell data with Harmony☆665Jun 5, 2026Updated last month
- R package implementation of Milo for testing for differential abundance in KNN graphs☆438May 11, 2026Updated last month
- R package for integrating and analyzing multiple single-cell datasets☆431Feb 4, 2026Updated 5 months ago
- SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.☆490Apr 5, 2024Updated 2 years ago
- R package for modeling single cell UMI expression data using regularized negative binomial regression☆266Jan 10, 2026Updated 5 months ago
- A Shiny web app for mapping datasets using Seurat v4☆148May 22, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Methods for detecting doublets in single-cell sequencing data☆256Jun 23, 2026Updated 2 weeks ago
- Inferring CNV from Single-Cell RNA-Seq☆676Nov 14, 2025Updated 7 months ago
- R package to visualize gene expression data based on weighted kernel density estimation☆115Feb 6, 2026Updated 5 months ago
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆333Nov 1, 2022Updated 3 years ago
- A toolkit for single-cell immune profiling☆372Jun 28, 2026Updated last week
- R package for the joint analysis of multiple single-cell RNA-seq datasets☆228Jul 2, 2026Updated last week
- ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)☆457Feb 18, 2025Updated last year
- Inferring, interpreting and visualising trajectories using a streamlined set of packages 🦕☆187Jun 24, 2021Updated 5 years ago
- SingleR: Single-cell RNA-seq cell types Recognition (legacy version)☆342Jul 28, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- R toolkit for the analysis of single-cell chromatin data☆421Jul 2, 2026Updated last week
- High dimensional weighted gene co-expression network analysis☆481Jun 16, 2026Updated 3 weeks ago
- RNA velocity estimation in R☆195Sep 14, 2023Updated 2 years ago
- A package to help convert different single-cell data formats to each other☆472Feb 20, 2026Updated 4 months ago
- Clone of the Bioconductor repository for the SingleR package.☆204Updated this week
- A R package for advanced single cell data viz☆75Aug 29, 2025Updated 10 months ago
- RNA Velocity generalized through dynamical modeling☆507Feb 25, 2026Updated 4 months ago
- ☆68Aug 2, 2019Updated 6 years ago
- Fast Wilcoxon and auROC☆213May 5, 2026Updated 2 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- ☆224Jun 13, 2026Updated 3 weeks ago
- A guide to using a Seurat object in conjunction with RNA Velocity☆142Dec 25, 2021Updated 4 years ago
- Easy single cell analysis platform for enrichment☆227Apr 3, 2026Updated 3 months ago
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆243May 8, 2023Updated 3 years ago
- Interactively analyze single cell genomic data☆189Jan 14, 2026Updated 5 months ago
- Seurat meets tidyverse. The best of both worlds.☆166Mar 3, 2026Updated 4 months ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆655Mar 11, 2026Updated 3 months ago