BRICK creates a BRIG-like interactive data visualisation for bacterial genome annotations and comparisons
☆22Dec 9, 2025Updated 7 months ago
Alternatives and similar repositories for brick
Users that are interested in brick are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Variant calling pipeline designed for Q20+ ONT long-reads☆15Jan 23, 2026Updated 6 months ago
- Host depletion optimised for clinical metagenomic sequencing applications☆19Jul 9, 2026Updated 2 weeks ago
- A tool to detect acquired AMR genes directly from long read sequencing data.☆28Jan 31, 2026Updated 5 months ago
- ☆15Feb 10, 2025Updated last year
- ☆33Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Plasmid analysis using rearrangement distances☆56Updated this week
- The AMRgen package provides tools for interpreting antimicrobial resistance (AMR) genes, integrating genomic data with phenotypic antimic…☆20Jul 15, 2026Updated last week
- TAXnomic Profile Aggregation and STAndardisation☆44May 2, 2026Updated 2 months ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆89Jul 7, 2026Updated 2 weeks ago
- Gene-flank analysis tool☆37Dec 18, 2024Updated last year
- Experiments with using BIGSI data structure for metagenomic and QC applications☆19Aug 12, 2024Updated last year
- Genome size estimation from long read overlaps☆92Jun 22, 2026Updated last month
- A rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller.☆32Jul 17, 2026Updated last week
- Compute a pairwise SNP distance matrix from one or two alignment(s)☆26Sep 12, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes☆38Jun 4, 2026Updated last month
- Interpretative standards for AMR genotypes☆30Updated this week
- Bifrost graph gene caller.☆98Jun 18, 2026Updated last month
- A new high-resolution long-read metagenome assembler for even noisy reads☆157Jul 3, 2026Updated 3 weeks ago
- The Whole Genome Sequencing Coverage Plot (wgscovplot) is a tool to generate HTML Interactive Coverage Plot given coverage depth informat…☆19May 3, 2024Updated 2 years ago
- Finding regions of similarity between plasmids☆17Jul 15, 2026Updated last week
- PopPUNK 👨🎤 (POPulation Partitioning Using Nucleotide Kmers)☆109Jun 2, 2026Updated last month
- Follow up to Grace Blackwell's 661k dataset, for 2023☆151Jun 10, 2026Updated last month
- Genomic neighbor typing of bacterial pathogens using MinHash☆42Jan 10, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- tool to determine optimal refrerence genome given a set of fasta files☆15May 18, 2023Updated 3 years ago
- Split k-mer analysis – version 2☆105Jul 9, 2026Updated 2 weeks ago
- Nextflow workflows to assign Salmonella serotype based on Genome similarity using MASH, SOURMASH and KMA.☆13Jul 2, 2026Updated 3 weeks ago
- BRIG is a cross-platform (Windows/Mac/Linux) application that displays circular comparison images of multiple genomes using BLAST.☆52Jul 1, 2026Updated 3 weeks ago
- A Python package to update the MLST database for the mlst tool.☆29Updated this week
- Recombination-free trees☆72Apr 26, 2026Updated 2 months ago
- ☆10Apr 16, 2025Updated last year
- software to identify primers that can distinguish genomes☆20Jan 23, 2026Updated 6 months ago
- ☆10Jun 9, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A k-mer based program for the identification of known plasmids from whole-genome sequencing reads☆36Feb 3, 2021Updated 5 years ago
- A genome diagram generator for microbes and organelles☆139Updated this week
- Phylogenetic compression of extremely large genome collections [661k ↘𝟭𝟲𝗚𝗶𝗕 | BIGSIdata ↘𝟰𝟴𝗚𝗶𝗕 | AllTheBact'23 ↘𝟳𝟱𝗚𝗶𝗕]☆48Jun 19, 2026Updated last month
- Targeted Detection and Reconstruction of Plasmids☆22May 7, 2024Updated 2 years ago
- A pipeline for bioinformatics analysis of bacterial genomes☆34Jul 17, 2026Updated last week
- Taxonomic Classification of Bacteria and Archaea Genomes☆16May 20, 2026Updated 2 months ago
- µbinfie blog☆19Jul 21, 2025Updated last year