royfrancis / pophelperLinks
An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
☆151Updated last year
Alternatives and similar repositories for pophelper
Users that are interested in pophelper are comparing it to the libraries listed below
Sorting:
- A primer for computational tools to analyze genetics of populations in R☆88Updated 4 years ago
- method for modeling continuous and discrete population genetic structure☆36Updated last year
- Shiny apps for teaching Population Genetics☆65Updated 2 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated last month
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated last month
- Estimating Effective Migration Surfaces☆103Updated last year
- ☆52Updated 3 years ago
- initial commit☆26Updated 2 years ago
- Population genetic simulations in R 🌍☆60Updated this week
- the hierfstat package☆25Updated 8 months ago
- R package and web app for spatial visualisation of admixture on a projected map☆44Updated 4 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆31Updated 5 months ago
- microhaplotype visualizer and analyzer☆19Updated 4 years ago
- Pdfs of slides from 2018 popgen course☆36Updated 6 years ago
- Population and Evolutionary Genetics Analysis System☆29Updated 5 months ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆29Updated 6 years ago
- ☆83Updated 2 months ago
- Fast and simple simulation-based population genetic inference in R☆27Updated last month
- adegenet: a R package for the multivariate analysis of genetic markers☆193Updated 6 months ago
- functions to analyse sanger sequencing reads in R☆101Updated 5 months ago
- ☆25Updated 3 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- Genome wide orthology inference and dNdS estimation☆95Updated last year
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- A collection of R code for dealing with SNP data and analyses☆24Updated 2 years ago
- ☆108Updated 3 weeks ago
- Using genome-wide markers for polyploid breeding☆11Updated 7 months ago
- Examples of application of comparative methods in R☆60Updated 2 years ago
- Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…☆8Updated 5 years ago
- stackr: an R package to run stacks software pipeline☆29Updated 4 months ago