royfrancis / pophelper
An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
☆146Updated last year
Alternatives and similar repositories for pophelper:
Users that are interested in pophelper are comparing it to the libraries listed below
- A primer for computational tools to analyze genetics of populations in R☆86Updated 4 years ago
- Shiny apps for teaching Population Genetics☆62Updated 2 years ago
- Estimating Effective Migration Surfaces☆102Updated last year
- Pdfs of slides from 2018 popgen course☆36Updated 6 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆68Updated 9 months ago
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.☆28Updated 2 years ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆26Updated 6 years ago
- Population genetic simulations in R 🌍☆56Updated 3 weeks ago
- Population and Evolutionary Genetics Analysis System☆29Updated 7 months ago
- the hierfstat package☆25Updated 2 months ago
- ☆52Updated 3 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆39Updated 4 months ago
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆63Updated 4 months ago
- Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putati…☆8Updated 5 years ago
- functions to analyse sanger sequencing reads in R☆100Updated 10 months ago
- R package and web app for spatial visualisation of admixture on a projected map☆42Updated last week
- ☆169Updated 4 years ago
- ☆29Updated 3 years ago
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆25Updated 9 months ago
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated 3 months ago
- Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝☆28Updated last year
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Analysis of Phylogenetics and Evolution☆60Updated last week
- a bash pipeline for RAD sequencing☆52Updated 3 weeks ago
- Grid and ggplot2 based visualization for biological data☆111Updated last year
- fastqcr: Quality Control of Sequencing Data☆69Updated last year
- stackr: an R package to run stacks software pipeline☆29Updated 4 years ago
- Automatically exported from code.google.com/p/jmodeltest2☆77Updated 3 years ago
- Genome wide orthology inference and dNdS estimation☆88Updated last year