NovembreLab / eems-around-the-worldLinks
Repo to analyze population genetic data with many different methods
☆15Updated 6 years ago
Alternatives and similar repositories for eems-around-the-world
Users that are interested in eems-around-the-world are comparing it to the libraries listed below
Sorting:
- Sweep Inference Framework (controlling for correlation)☆28Updated last year
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 7 months ago
- A series of scripts to automate sequence workflows☆19Updated 7 months ago
- ☆17Updated 10 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Updated 4 years ago
- Pipeline for structural variant image curation and analysis.☆49Updated 4 years ago
- Functions to compare a SV call sets against a truth set.☆30Updated 7 months ago
- Repository for pipeline code☆26Updated last year
- Population-based detection of structural variation from High-Throughput Sequencing.☆33Updated 3 years ago
- machine learning applications for dadi☆16Updated 11 months ago
- Tools for merging Tandem Repeat VCF files☆37Updated 8 months ago
- Work for the tree sequence inference paper.☆23Updated 5 years ago
- Personal diploid genome creation and coordinate conversion☆30Updated 9 months ago
- Haplotype and population structure inference using neural networks.☆27Updated last year
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆25Updated 4 years ago
- Evolutionary Transcriptomics with R☆47Updated this week
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- Two locus likelihoods and ARGs under changing population size☆14Updated last month
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated 2 months ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated 2 years ago
- detection of duplications and deletions using Python based machine learning techniques☆28Updated 6 years ago
- Pipeline for Phylostratigraphy☆13Updated 3 years ago
- ☆11Updated 3 years ago
- Preprocessing paired-end reads produced with experiment-specific protocols☆32Updated 7 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆14Updated 9 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 9 months ago
- Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)☆18Updated 3 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- ☆29Updated 3 years ago
- ☆29Updated 6 years ago