NovembreLab / eems-around-the-world
Repo to analyze population genetic data with many different methods
☆15Updated 5 years ago
Alternatives and similar repositories for eems-around-the-world:
Users that are interested in eems-around-the-world are comparing it to the libraries listed below
- Sweep Inference Framework (controlling for correlation)☆29Updated 8 months ago
- Research repo for Yang et al., 2017 paper.☆9Updated 5 years ago
- ☆17Updated 9 years ago
- Genome-wide scan for balancing selection using beta statistic☆28Updated last year
- Haplotype and population structure inference using neural networks.☆27Updated 3 months ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- Minimal Assumption Genomic Inference of Coalescence☆14Updated last year
- ☆11Updated 2 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 2 years ago
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated last month
- Transposable element polymorphism identification☆33Updated 4 years ago
- Work for the tree sequence inference paper.☆23Updated 4 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 3 months ago
- A program for the Maximum-likelihood analysis of population genomic data.☆28Updated 3 years ago
- Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)☆14Updated 2 years ago
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Updated 7 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Evolutionary Transcriptomics with R☆42Updated 2 weeks ago
- A series of scripts to automate sequence workflows☆19Updated 6 months ago
- Genealogical Estimation of Variant Age (GEVA)☆28Updated 3 years ago
- Module for analysing admixture graphs☆28Updated 6 years ago
- CNEFinder: Finding Conserved Non-coding Elements in Genomes☆23Updated 3 years ago
- Evaluation of phasing performance☆22Updated 7 years ago
- R-package: Calculation of haplotype blocks and libraries☆30Updated 3 weeks ago
- Split-read pipeline for the identification of non-reference TE insertions with TSDs☆24Updated 4 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- Bayesian reconstruction of ancient DNA fragments☆27Updated 7 months ago
- A simple tool to fix PacBio fasta/q that was not properly split into subreads☆14Updated 3 years ago
- Pipeline for Phylostratigraphy☆13Updated 2 years ago
- Population-wide Deletion Calling☆35Updated 6 months ago