A package for population structure inference from RAD-seq data
☆35May 14, 2021Updated 4 years ago
Alternatives and similar repositories for fineRADstructure
Users that are interested in fineRADstructure are comparing it to the libraries listed below
Sorting:
- An R Package to build and simulate coalescent models☆20Updated this week
- Module for analysing admixture graphs☆28Apr 30, 2018Updated 7 years ago
- Time-stratified f-statistics☆15Aug 1, 2025Updated 7 months ago
- RADseq Data Exploration, Manipulation and Visualization using R☆60Sep 4, 2025Updated 6 months ago
- method for modeling continuous and discrete population genetic structure☆38Jan 8, 2024Updated 2 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆30Sep 27, 2019Updated 6 years ago
- TESS3 is a fast and efficient program for estimating spatial population structure based on geographically constrained non-negative matrix…☆22Jun 21, 2023Updated 2 years ago
- Process MS results in R, in a tidy way☆16May 25, 2018Updated 7 years ago
- Faster multispecies coalescent inference using multilocus data☆14Aug 13, 2023Updated 2 years ago
- diveRsity: A comprehensive, general purpose population genetics analysis package.☆26Mar 8, 2026Updated 2 weeks ago
- Software for painlessly estimating average nucleotide diversity within and between populations☆157Oct 27, 2025Updated 4 months ago
- ☆12Mar 11, 2025Updated last year
- Assembly and analysis of RADseq data sets☆27Aug 22, 2016Updated 9 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 7 years ago
- microhaplotype visualizer and analyzer☆20Jun 24, 2021Updated 4 years ago
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- Collection of Python scripts for parsing/analyses of RAD-seq data☆25Mar 5, 2025Updated last year
- ☆30Oct 14, 2022Updated 3 years ago
- A Framework for Coalescent Simulation in R☆24Mar 20, 2024Updated 2 years ago
- software for the MAPS method☆25Mar 20, 2019Updated 7 years ago
- R package: Evolutionary biology in R☆20Updated this week
- A utility for splitting mixed origin NGS reads☆10Jun 1, 2021Updated 4 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆44Jul 25, 2025Updated 7 months ago
- Inference of population structure from time-series genotype data☆15Jul 9, 2019Updated 6 years ago
- A statistical framework for reference-free inference of archaic local ancestry☆16Nov 8, 2019Updated 6 years ago
- Simple and flexible manipulation of genomic data.☆16Apr 16, 2025Updated 11 months ago
- ☆15Jul 17, 2019Updated 6 years ago
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Jan 5, 2026Updated 2 months ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 7 years ago
- A python framework for inferring demography from tracts of identity by state as reported in PLoS Genetics by Harris and Nielsen (2013)☆15Aug 1, 2013Updated 12 years ago
- ☆15Dec 3, 2024Updated last year
- ☆22Jun 9, 2021Updated 4 years ago
- Infer demographic history with the Moran model☆51Jun 14, 2025Updated 9 months ago
- Detects and blacklists paralog RAD loci analyzed in Stacks or ipyrad, based on the McKinney 2017 method (doi:10.1111/1755-0998.12613)☆10Sep 4, 2019Updated 6 years ago
- An R interface for the ADMIXTOOLS software☆35Nov 24, 2025Updated 3 months ago
- A collection of R code for dealing with SNP data and analyses☆24May 16, 2023Updated 2 years ago
- A variational framework for inferring population structure from SNP genotype data.☆143Jan 6, 2023Updated 3 years ago
- This repository contains the code and manual for the R package delimitR.☆17Apr 19, 2022Updated 3 years ago
- Scripts used in the annotation of B10K genomes☆15Jun 1, 2020Updated 5 years ago