Alternatives and similar repositories for binmapr

Users that are interested in binmapr are comparing it to the libraries listed below

• caulilin / QTG_Seq
  ☆22Updated 6 years ago
• weigelworld / pan-nlrome
  The GitHub repository for the A. thaliana pan-NLR'ome project.
  ☆17Updated 6 years ago
• YaoLab-Bioinfo / binQTL
  QTL mapping with binmap data
  ☆18Updated 6 years ago
• guokai8 / CandiHap
  Build haplotye and generate figures
  ☆18Updated 3 years ago
• LAILAB-CAU / update-Mo17
  ☆25Updated 2 years ago
• xiekunwhy / bsa
  Bulked-Segregant Analysis using vcf file with or without parents
  ☆28Updated 6 months ago
• dongwei1220 / EasySpeciesTree
  Easily construct the ML species tree with single-copy gene shared by different species.
  ☆27Updated 6 years ago
• liangjiaoxue / PythonNGSTools
  Scripts for NGS processing
  ☆17Updated 7 years ago
• WenchaoLin / GCcalc
  Calculate circos format data of GC content and GC skew from genome data.
  ☆11Updated 10 years ago
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 3 years ago
• Iceylee / NGS-Pacbio
  Pipelines and scripts for analysing RNA-seq，genome and other sequecing data.
  ☆9Updated 5 years ago
• baduelp / public
  ☆16Updated 9 months ago
• mcstitzer / maize_v4_TE_annotation
  scripts and intermediate files used to annotate TEs in Jiao et al.
  ☆35Updated 7 years ago
• yongzhiyang2012 / WGDdetector
  ☆21Updated 5 years ago
• Nextomics / pipeline-for-isoseq
  A pipeline for isoseq
  ☆23Updated 7 years ago
• caulai / Mo17_genome_assembly
  ☆14Updated 5 years ago
• hewm2008 / VCF2Dis
  VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files
  ☆42Updated 2 months ago
• owensgl / haploblocks
  Scripts and resources for the haploblocks manuscript
  ☆16Updated 5 years ago
• xuzhougeng / wgap
  Whole Genome Annotation Pipeline
  ☆17Updated 3 weeks ago
• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆26Updated 2 months ago
• Sunhh / NGS_data_processing
  Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.
  ☆55Updated last month
• GaoLei-bio / SV
  ☆14Updated 3 years ago
• xukaili / CandiHap
  A haplotype analysis toolkit for natural variation study.
  ☆30Updated last year
• yilinZhang-bio / Watermelon-pangenome
  ☆22Updated last year
• rojaff / LanGen_pipeline
  Suit of R-scripts to perform landscape genomic analyses
  ☆14Updated 5 years ago
• Farre-lab / syntenyPlotteR
  R package to draw syntenic plots in 3 different styles
  ☆41Updated last year
• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆40Updated 4 years ago
• popgenome / lettuce2020
  Codes for the lettuce resequencing project in 2020
  ☆30Updated 4 years ago
• ListerLab / TEPID
  Transposable element polymorphism identification
  ☆33Updated 4 years ago
• HuffordLab / Maize_NC358
  The repository for codes developed to generated the Maize NC358 assemblies and analyses.
  ☆10Updated 5 years ago