thibautjombart / adegenetLinks
adegenet: a R package for the multivariate analysis of genetic markers
☆198Updated 10 months ago
Alternatives and similar repositories for adegenet
Users that are interested in adegenet are comparing it to the libraries listed below
Sorting:
- A primer for computational tools to analyze genetics of populations in R☆89Updated 4 years ago
- ☆227Updated last month
- Tools to work with variant call format files☆264Updated 2 months ago
- Phylogenetic analysis in R☆212Updated last month
- R package for microbiome biomarker discovery☆192Updated 10 months ago
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆149Updated last week
- ☆111Updated 2 months ago
- functions to analyse sanger sequencing reads in R☆104Updated last month
- ☆86Updated last year
- Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package☆112Updated 2 months ago
- Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data☆144Updated 10 months ago
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆95Updated last month
- Workshop materials for SFSU SCIP 2022.☆15Updated 3 years ago
- A grammar of genomic data transformation☆150Updated last month
- An R package for creating Q-Q and manhattan plots from GWAS results☆171Updated 2 months ago
- An R package for microbial community analysis in an environmental context☆67Updated 5 years ago
- Materials for the STAMPS 2019 course at the MBL in Woods Hole, MA, USA☆34Updated 6 years ago
- Repo for a Microbiome Protocol☆10Updated 7 years ago
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆222Updated 2 months ago
- JAMP - Just Another Metabarcoding Pipeline☆38Updated 3 years ago
- A list of R environment based tools for microbiome data exploration, statistical analysis and visualization☆117Updated 2 years ago
- ☆56Updated 3 years ago
- Differential abundance (DA) and correlation analyses for microbial absolute abundance data☆126Updated 3 months ago
- microbiome R package☆308Updated 4 months ago
- Pairwise multilevel comparison using adonis☆80Updated 2 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆72Updated 3 months ago
- Visualize microbiome data with black magic ggtree☆68Updated 5 years ago
- Grid and ggplot2 based visualization for biological data☆115Updated 2 months ago
- Shiny apps for teaching Population Genetics☆66Updated 2 years ago
- This tutorial runs through the basics of ggplot2 and how to make a figure ready for publication.☆56Updated 5 years ago