singhal / popgen_tutorialLinks
☆11Updated 5 years ago
Alternatives and similar repositories for popgen_tutorial
Users that are interested in popgen_tutorial are comparing it to the libraries listed below
Sorting:
- Genome-wide scan for balancing selection using beta statistic☆29Updated 2 years ago
- ☆14Updated 2 years ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 6 years ago
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆16Updated 4 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆51Updated 2 weeks ago
- Tools for inference of the DFE with dadi☆14Updated 4 years ago
- Module for analysing admixture graphs☆28Updated 7 years ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- Utilities for analyzing next generation sequencing data☆17Updated 6 years ago
- A statistical framework for reference-free inference of archaic local ancestry☆16Updated 5 years ago
- Population genetics analyses from NGS data☆25Updated 4 years ago
- Faster multispecies coalescent inference using multilocus data☆13Updated last year
- BayeScEnv is a Fst-based, genome-scan method that uses environmental variables to detect local adaptation.☆19Updated 7 years ago
- The MafFilter genome alignment processor☆18Updated 3 weeks ago
- ☆13Updated last year
- Code and binaries related to processing haplotagging data☆15Updated 3 years ago
- Estimation of per-individual inbreeding coefficients under a probabilistic framework☆19Updated last year
- Genetic Map Comparison☆20Updated 2 years ago
- A genome-wide IM blockwise likelihood estimation toolkit☆16Updated 11 months ago
- a tool to identify species and inter-species hybrids and chromosome copy number variants from short-read data☆19Updated 5 years ago
- Kinship (genetic relatedness) using GBS (genotyping-by-sequencing) with Depth adjustment☆21Updated 2 weeks ago
- ☆20Updated last year
- Tools and Utilities for msmc and msmc2☆47Updated last year
- Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit☆11Updated 5 years ago
- Scripts for reformatting data. Mainly from tab separated to an esoteric program specific format☆13Updated 3 months ago
- Likelihood-based Selective Sweep Detection☆37Updated last year
- predicting DFE and alpha from polymorphism data☆28Updated 6 years ago
- Tutorial on using popular tools for learning about population history☆51Updated 6 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆25Updated 5 years ago
- ☆17Updated 9 years ago