thierrygosselin / assignerLinks
Population assignment analysis using R
☆16Updated 5 months ago
Alternatives and similar repositories for assigner
Users that are interested in assigner are comparing it to the libraries listed below
Sorting:
- A package for population structure inference from RAD-seq data☆34Updated 4 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆17Updated 3 years ago
- Simple and flexible manipulation of genomic data.☆16Updated 7 months ago
- Collection of Python scripts for parsing/analyses of RAD-seq data☆24Updated 9 months ago
- ABLE - Approximate Blockwise Likelihood Estimation☆17Updated 7 years ago
- An R Package to build and simulate coalescent models☆20Updated 2 months ago
- Distinguishing among modes of convergent adaptation using population genomic data: statistical inference method, extensions, and examples☆13Updated 6 years ago
- Scripts for population genetics analysis☆20Updated 3 years ago
- ☆19Updated 7 years ago
- ☆30Updated 3 years ago
- Tools for data conversion and results visualization for fineRADstructure (http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html)☆10Updated 5 years ago
- method for modeling continuous and discrete population genetic structure☆38Updated last year
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆22Updated last year
- D Frequency Spectrum: Signatures of introgression across the allele frequency spectrum☆19Updated 5 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated last month
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Helper scripts for processing and visualization of phylogenetics datasets☆30Updated last year
- Script for removing or counting invariant sites for the RAxML ascertainment bias corrections☆16Updated last year
- Phylogenetic penalized likelihood☆54Updated 5 months ago
- Quartet Sampling method for phylogenetic branch support evaluation☆19Updated last year
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆43Updated 4 months ago
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- A program for the Maximum-likelihood analysis of population genomic data.☆30Updated 4 years ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆20Updated 4 years ago
- ☆18Updated 5 years ago
- R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes☆29Updated 6 years ago
- A framework for simulation-based inference in evolutionary biology☆26Updated last week
- A genome-wide IM blockwise likelihood estimation toolkit☆17Updated last year
- Infer demographic history with the Moran model☆50Updated 5 months ago
- ☆42Updated 2 years ago