Automatically exported from code.google.com/p/figtree
☆489May 17, 2026Updated 3 months ago
Alternatives and similar repositories for figtree
Users that are interested in figtree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Posterior summarisation in Bayesian phylogenetics☆74Sep 27, 2025Updated 11 months ago
- Bayesian Evolutionary Analysis Sampling Trees☆248Updated this week
- MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentati…☆277Aug 13, 2026Updated 2 weeks ago
- Bayesian Evolutionary Analysis by Sampling Trees☆282Jul 13, 2026Updated last month
- RAxML Next Generation: faster, easier-to-use and more flexible☆476Aug 18, 2026Updated last week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PhyML -- Phylogenetic estimation using (Maximum) Likelihood☆199May 28, 2026Updated 3 months ago
- Visualization and annotation of phylogenetic trees☆933Apr 29, 2026Updated 4 months ago
- ☆351Mar 4, 2025Updated last year
- IQ-TREE software version 2: phylogenetics by maximum likelihood☆335Jul 22, 2026Updated last month
- Mummer alignment tool☆573Feb 4, 2025Updated last year
- Phylogenetic orthology inference for comparative genomics☆869Jul 15, 2025Updated last year
- TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)☆21Oct 9, 2019Updated 6 years ago
- A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0☆269Updated this week
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆255Updated this week
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Accurate Species TRee ALgorithm☆281Apr 1, 2024Updated 2 years ago
- general purpose library for evaluating the likelihood of sequence evolution on trees☆148Updated this week
- Efficient phylogenomic software by maximum likelihood☆211Nov 4, 2021Updated 4 years ago
- Genome annotation with AUGUSTUS☆338May 30, 2026Updated 3 months ago
- Automatically exported from code.google.com/p/jmodeltest2☆84Sep 26, 2021Updated 4 years ago
- Automatically exported from code.google.com/p/cdhit☆731Oct 11, 2022Updated 3 years ago
- Toolkit for processing sequences in FASTA/Q formats☆1,558Jun 1, 2025Updated last year
- Accelerated BLAST compatible local sequence aligner.☆1,316Aug 4, 2026Updated 3 weeks ago
- R tools for posterior analyses using BEAST☆20Apr 10, 2019Updated 7 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- PartitionFinder discovers optimal partitioning schemes for DNA sequences.☆72Mar 10, 2021Updated 5 years ago
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆2,242May 19, 2026Updated 3 months ago
- Python library to facilitate genome assembly, annotation, and comparative genomics☆928Aug 12, 2026Updated 2 weeks ago
- Sequence simulator☆55Feb 3, 2025Updated last year
- Trinity RNA-Seq de novo transcriptome assembly☆898Apr 23, 2026Updated 4 months ago
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆56Mar 2, 2026Updated 5 months ago
- Synteny and Rearrangement Identifier☆485Jul 1, 2026Updated last month
- ☆233Aug 14, 2026Updated 2 weeks ago
- The second version of the Kraken taxonomic sequence classification system☆935Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- PhyloSuite is an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogeneti…☆178Jul 22, 2026Updated last month
- hybrid assembly pipeline for bacterial genomes☆651Jul 29, 2026Updated last month
- An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)☆2,423Jul 30, 2026Updated last month
- Rapid haploid variant calling and core genome alignment☆591Dec 12, 2025Updated 8 months ago
- Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.☆187Jul 30, 2026Updated last month
- Finds SNP sites from a multi-FASTA alignment file☆278Dec 16, 2020Updated 5 years ago
- SPAdes Genome Assembler☆956Jun 16, 2026Updated 2 months ago