rambaut / figtreeLinks
Automatically exported from code.google.com/p/figtree
☆437Updated 3 months ago
Alternatives and similar repositories for figtree
Users that are interested in figtree are comparing it to the libraries listed below
Sorting:
- ☆346Updated 7 months ago
- Tutorials on phylogenetic and phylogenomic inference☆388Updated 2 years ago
- Interactively explore metagenomes and more from a web browser.☆489Updated 3 years ago
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆272Updated 2 months ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆439Updated this week
- 🌈 Interactive analysis of metagenomics data☆427Updated 3 weeks ago
- IQ-TREE software version 2: phylogenetics by maximum likelihood☆307Updated 5 months ago
- Genome annotation with AUGUSTUS☆317Updated last month
- Mummer alignment tool☆526Updated 8 months ago
- A complete pipeline for metagenomic analysis☆432Updated last month
- Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis☆318Updated 2 years ago
- A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV☆440Updated 5 months ago
- Mass screening of contigs for antimicrobial and virulence genes☆436Updated last year
- Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)☆347Updated 8 months ago
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆388Updated 4 months ago
- Rapid large-scale prokaryote pan genome analysis☆355Updated 3 years ago
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆426Updated 8 months ago
- Eukaryotic Genome Annotation Pipeline☆365Updated 3 months ago
- hybrid assembly pipeline for bacterial genomes☆618Updated last year
- Fast Whole-Genome Similarity (ANI) Estimation☆431Updated 2 months ago
- a Bioinformatics Application for Navigating De novo Assembly Graphs Easily☆644Updated 2 years ago
- Genome assembly evaluation tool☆467Updated 11 months ago
- MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis☆444Updated 2 years ago
- Phylogenetic orthology inference for comparative genomics☆797Updated 2 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆554Updated this week
- NCBI Prokaryotic Genome Annotation Pipeline☆354Updated this week
- Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species i…☆321Updated 7 months ago
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆389Updated 2 weeks ago
- ☆268Updated last month
- Code, unit tests, and tutorials for running PICRUSt2☆368Updated 6 months ago