CompEvol / beast2Links
Bayesian Evolutionary Analysis by Sampling Trees
☆261Updated 3 weeks ago
Alternatives and similar repositories for beast2
Users that are interested in beast2 are comparing it to the libraries listed below
Sorting:
- Bayesian Evolutionary Analysis Sampling Trees☆232Updated last week
- MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentati…☆256Updated 8 months ago
- Efficient phylogenomic software by maximum likelihood☆203Updated 4 years ago
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆274Updated last month
- ☆346Updated 9 months ago
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins☆207Updated 3 months ago
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆248Updated this week
- Programs to analyse NGS data for population genetics purposes☆178Updated last year
- general purpose library for evaluating the likelihood of sequence evolution on trees☆141Updated last month
- Convert various sequence formats to FASTA☆140Updated last week
- Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species i…☆331Updated 9 months ago
- A tool to circularize genome assemblies☆249Updated last year
- Automatically exported from code.google.com/p/figtree☆451Updated 5 months ago
- Kraken taxonomic sequence classification system☆218Updated 4 years ago
- A user-friendly workflow for phylogenomics☆222Updated 3 weeks ago
- Bacterial ribosomal RNA predictor☆263Updated this week
- HyPhy: Hypothesis testing using Phylogenies☆245Updated this week
- Program for analysing NGS data.☆250Updated 9 months ago
- ☆131Updated 2 years ago
- Fast genome and metagenome distance estimation using MinHash☆428Updated 2 months ago
- Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis☆326Updated 2 years ago
- Best-fit model selection☆85Updated last year
- Analyze changes in gene family size and provide a statistical foundation for evolutionary inferences.☆118Updated 4 years ago
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆241Updated last year
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆246Updated this week
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆91Updated 3 months ago
- A variational framework for inferring population structure from SNP genotype data.☆142Updated 2 years ago
- Genome Assembly and Annotation Service code☆215Updated last year
- Automatically exported from code.google.com/p/jmodeltest2☆82Updated 4 years ago
- ☆270Updated 5 months ago