CompEvol / beast2Links
Bayesian Evolutionary Analysis by Sampling Trees
☆256Updated 3 weeks ago
Alternatives and similar repositories for beast2
Users that are interested in beast2 are comparing it to the libraries listed below
Sorting:
- Bayesian Evolutionary Analysis Sampling Trees☆229Updated this week
- MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentati…☆252Updated 5 months ago
- Efficient phylogenomic software by maximum likelihood☆202Updated 3 years ago
- general purpose library for evaluating the likelihood of sequence evolution on trees☆138Updated last week
- Programs to analyse NGS data for population genetics purposes☆176Updated last year
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆272Updated last month
- Kraken taxonomic sequence classification system☆216Updated 3 years ago
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆246Updated this week
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins☆200Updated 3 weeks ago
- Automatically exported from code.google.com/p/figtree☆437Updated 2 months ago
- Convert SNPs in VCF format to PHYLIP, NEXUS, binary NEXUS, or FASTA alignments for phylogenetic analysis☆314Updated 2 years ago
- ☆346Updated 6 months ago
- A tool to circularize genome assemblies☆247Updated last year
- Posterior summarisation in Bayesian phylogenetics☆65Updated 3 months ago
- A user-friendly workflow for phylogenomics☆219Updated last month
- Automatically exported from code.google.com/p/jmodeltest2☆81Updated 3 years ago
- Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species i…☆321Updated 6 months ago
- Best-fit model selection☆82Updated last year
- A variational framework for inferring population structure from SNP genotype data.☆142Updated 2 years ago
- Tools test whether admixture occurred and more☆210Updated last year
- Convert various sequence formats to FASTA☆138Updated 3 years ago
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆236Updated 2 years ago
- Fast genome and metagenome distance estimation using MinHash☆418Updated last year
- Program for analysing NGS data.☆242Updated 6 months ago
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆92Updated last month
- Quality control for MinION sequencing data☆216Updated 2 years ago
- Bacterial ribosomal RNA predictor☆255Updated 2 years ago
- ☆131Updated 2 years ago
- Inference of ploidy and heterozygosity structure using whole genome sequencing data☆277Updated 2 weeks ago
- ☆261Updated 2 months ago