CompEvol / beast2Links
Bayesian Evolutionary Analysis by Sampling Trees
☆259Updated this week
Alternatives and similar repositories for beast2
Users that are interested in beast2 are comparing it to the libraries listed below
Sorting:
- Bayesian Evolutionary Analysis Sampling Trees☆230Updated this week
- MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentati…☆256Updated 7 months ago
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆274Updated last week
- Efficient phylogenomic software by maximum likelihood☆203Updated 4 years ago
- general purpose library for evaluating the likelihood of sequence evolution on trees☆141Updated 3 weeks ago
- Programs to analyse NGS data for population genetics purposes☆177Updated last year
- ☆346Updated 8 months ago
- Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species i…☆323Updated 8 months ago
- Automatically exported from code.google.com/p/figtree☆447Updated 4 months ago
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins☆207Updated 2 months ago
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆247Updated this week
- Convert various sequence formats to FASTA☆139Updated 3 years ago
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆240Updated last year
- Code repository of the Earth Microbiome Project.☆163Updated 2 years ago
- ☆269Updated 4 months ago
- A tool to circularize genome assemblies☆248Updated last year
- Tutorials on phylogenetic and phylogenomic inference☆393Updated 2 years ago
- Bacterial ribosomal RNA predictor☆261Updated 2 years ago
- Best-fit model selection☆85Updated last year
- Kraken taxonomic sequence classification system☆218Updated 4 years ago
- Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data☆165Updated 2 months ago
- Fast genome and metagenome distance estimation using MinHash☆426Updated 2 months ago
- A fully reproducible and state-of-the-art ancient DNA analysis pipeline☆186Updated last week
- A variational framework for inferring population structure from SNP genotype data.☆143Updated 2 years ago
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆240Updated 2 years ago
- ☆131Updated 2 years ago
- A user-friendly workflow for phylogenomics☆222Updated this week
- treeWAS: A Phylogenetic Tree-Based Tool for Genome-Wide Association Studies in Microbes☆105Updated 9 months ago
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆91Updated 3 months ago
- Program for analysing NGS data.☆248Updated 8 months ago