CompEvol / beast2Links
Bayesian Evolutionary Analysis by Sampling Trees
☆267Updated 2 weeks ago
Alternatives and similar repositories for beast2
Users that are interested in beast2 are comparing it to the libraries listed below
Sorting:
- Bayesian Evolutionary Analysis Sampling Trees☆234Updated last week
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆276Updated 3 weeks ago
- MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentati…☆257Updated 3 weeks ago
- Efficient phylogenomic software by maximum likelihood☆204Updated 4 years ago
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins☆211Updated 5 months ago
- Code repository of the Earth Microbiome Project.☆163Updated 3 years ago
- Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species i…☆336Updated 11 months ago
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆249Updated this week
- 🐙 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results☆243Updated 2 years ago
- Bacterial ribosomal RNA predictor☆279Updated 3 weeks ago
- general purpose library for evaluating the likelihood of sequence evolution on trees☆142Updated last week
- Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets☆208Updated last year
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆91Updated 5 months ago
- A user-friendly workflow for phylogenomics☆225Updated this week
- ☆347Updated 11 months ago
- Kraken taxonomic sequence classification system☆220Updated 4 years ago
- Convert various sequence formats to FASTA☆146Updated last month
- A tool to circularize genome assemblies☆251Updated last year
- ⚡♠️ Assemble bacterial isolate genomes from Illumina paired-end reads☆252Updated last month
- Fast taxonomic classification of metagenomic sequencing reads using a protein reference database☆298Updated 9 months ago
- The core Mesquite repository☆111Updated this week
- CAT/BAT/RAT: tools for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) and for taxonomic profiling of metage…☆223Updated 2 weeks ago
- Programs to analyse NGS data for population genetics purposes☆178Updated last year
- Tutorials on phylogenetic and phylogenomic inference☆393Updated 2 years ago
- Program for analysing NGS data.☆252Updated 11 months ago
- Fast genome and metagenome distance estimation using MinHash☆434Updated 4 months ago
- Quality control for MinION sequencing data☆216Updated 3 years ago
- ☆132Updated 2 years ago
- Finds SNP sites from a multi-FASTA alignment file☆273Updated 5 years ago
- Automatically exported from code.google.com/p/figtree☆455Updated 7 months ago