liamrevell / phytoolsLinks
☆223Updated 2 weeks ago
Alternatives and similar repositories for phytools
Users that are interested in phytools are comparing it to the libraries listed below
Sorting:
- Phylogenetic analysis in R☆207Updated last week
- adegenet: a R package for the multivariate analysis of genetic markers☆193Updated 5 months ago
- Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data☆141Updated 5 months ago
- Pairwise multilevel comparison using adonis☆77Updated 2 years ago
- A primer for computational tools to analyze genetics of populations in R☆87Updated 4 years ago
- Base Classes and Functions for Phylogenetic Tree Input and Output☆103Updated 3 months ago
- Analysis of Phylogenetics and Evolution☆69Updated last month
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆150Updated last year
- Examples of application of comparative methods in R☆59Updated 2 years ago
- A dynamic database of fungal trait measurements☆77Updated 5 years ago
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆94Updated 2 weeks ago
- JAMP - Just Another Metabarcoding Pipeline☆36Updated 3 years ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated 3 weeks ago
- Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package☆111Updated 2 weeks ago
- Increased efficiency in identifying mixed pollen samples by meta-barcoding with a dual-indexing approach - Computational methods☆10Updated 3 years ago
- Species richness with high diversity☆68Updated 3 months ago
- R package for downstream analysis for anacapa eDNA pipeline☆22Updated 3 years ago
- Miscellaneous functions for metagenomic analysis.☆50Updated last month
- Import qiime2 artifacts to R☆172Updated 7 months ago
- ☆108Updated last week
- R package for microbiome biomarker discovery☆186Updated 4 months ago
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆212Updated last month
- ☆84Updated last year
- ☆52Updated 3 years ago
- Pipeline to analyze eDNA metabarcoding samples (PE and SE, demultiplexed, multiplexed)☆12Updated 3 years ago
- a complete reference book for treeio, tidytree and ggtree packages☆104Updated 3 years ago
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆68Updated 3 months ago
- Count Regression for Correlated Observations with the Beta-binomial☆106Updated 3 months ago
- Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…☆33Updated 4 months ago
- diversity estimation under ecological networks☆84Updated 3 months ago