beast-dev / beast-mcmcLinks
Bayesian Evolutionary Analysis Sampling Trees
☆230Updated this week
Alternatives and similar repositories for beast-mcmc
Users that are interested in beast-mcmc are comparing it to the libraries listed below
Sorting:
- Bayesian Evolutionary Analysis by Sampling Trees☆259Updated this week
- MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentati…☆256Updated 7 months ago
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆247Updated this week
- general purpose library for evaluating the likelihood of sequence evolution on trees☆141Updated 3 weeks ago
- Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Imm…☆274Updated last week
- Efficient phylogenomic software by maximum likelihood☆203Updated 4 years ago
- Code repository of the Earth Microbiome Project.☆163Updated 2 years ago
- Programs to analyse NGS data for population genetics purposes☆177Updated last year
- Simulate genealogical trees and genomic sequence data using population genetic models☆202Updated 2 months ago
- Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins☆207Updated 2 months ago
- Posterior summarisation in Bayesian phylogenetics☆66Updated last month
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆221Updated 3 weeks ago
- ☆346Updated 8 months ago
- PhyML -- Phylogenetic estimation using (Maximum) Likelihood☆194Updated 2 months ago
- baltic - backronymed adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. Development…☆112Updated last week
- ☆12Updated 8 months ago
- Program for analysing NGS data.☆248Updated 8 months ago
- SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexib…☆201Updated 2 weeks ago
- A variational framework for inferring population structure from SNP genotype data.☆143Updated 2 years ago
- Kraken taxonomic sequence classification system☆218Updated 4 years ago
- Convert various sequence formats to FASTA☆139Updated 3 years ago
- Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data☆165Updated 2 months ago
- Automatically exported from code.google.com/p/jmodeltest2☆82Updated 4 years ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆441Updated 3 weeks ago
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆91Updated 3 months ago
- phylogenetics tools for linux (and other mostly posix compliant) computers☆122Updated 10 months ago
- A library of standard population genetic models☆137Updated this week
- HyPhy: Hypothesis testing using Phylogenies☆245Updated 2 weeks ago
- treeWAS: A Phylogenetic Tree-Based Tool for Genome-Wide Association Studies in Microbes☆105Updated 9 months ago
- A user-friendly workflow for phylogenomics☆222Updated this week