MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:
☆280Oct 9, 2026Updated last week
Alternatives and similar repositories for MrBayes
Users that are interested in MrBayes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- general purpose library for evaluating the likelihood of sequence evolution on trees☆147Updated this week
- Bayesian Evolutionary Analysis by Sampling Trees☆285Jul 13, 2026Updated 3 months ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆480Updated this week
- Automatically exported from code.google.com/p/figtree☆490May 17, 2026Updated 5 months ago
- Posterior summarisation in Bayesian phylogenetics☆77Sep 27, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- C program for selecting DNA substitution models using PAUP*☆19Mar 24, 2020Updated 6 years ago
- Automatically exported from code.google.com/p/jmodeltest2☆84Sep 26, 2021Updated 5 years ago
- PhyML -- Phylogenetic estimation using (Maximum) Likelihood☆199May 28, 2026Updated 4 months ago
- ☆352Mar 4, 2025Updated last year
- Bayesian analysis of genomic sequence data under the multispecies coalescent model☆115Oct 3, 2026Updated 2 weeks ago
- Scalable relaxed clock phylogenetic dating☆29Jul 5, 2026Updated 3 months ago
- Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language☆91Updated this week
- Accurate Species TRee ALgorithm☆281Apr 1, 2024Updated 2 years ago
- ☆68Oct 17, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Best-fit model selection☆91Mar 21, 2024Updated 2 years ago
- Welcome to Physcraper’s repository! Automatic gene tree updating using the Open Tree of Life.☆13May 13, 2022Updated 4 years ago
- Tutorial on Bayesian phylogenetic analysis☆53Sep 21, 2017Updated 9 years ago
- PhyloSuite is an integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogeneti…☆182Jul 22, 2026Updated 2 months ago
- R We There Yet?☆33Mar 27, 2025Updated last year
- Efficient phylogenomic software by maximum likelihood☆211Nov 4, 2021Updated 4 years ago
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Sep 15, 2026Updated last month
- Organelle Genome Assembly Toolkit (Chloroplast/Mitocondrial/ITS)☆399Feb 13, 2025Updated last year
- PAML is a package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. Please report only **techni…☆206Jan 29, 2026Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- phylobayes mpi☆28Jul 30, 2026Updated 2 months ago
- Bayesian Evolutionary Analysis Sampling Trees☆248Updated this week
- Software for aligning viewing and editing dna/aminoacid sequences, intuitive, fast and lightweight. Download and website:☆161Sep 28, 2026Updated 2 weeks ago
- A program for multimodel inference on speciation and trait evolution☆36Sep 4, 2017Updated 9 years ago
- Fast genome analysis from unassembled short reads☆328Apr 8, 2024Updated 2 years ago
- NOVOPlasty - The organelle assembler and heteroplasmy caller☆201Feb 4, 2024Updated 2 years ago
- FASconCAT-G offers a wide range of possibilities to edit and concatenate multiple nucleotide, amino acid, and structure sequence alignmen…☆35Jun 12, 2024Updated 2 years ago
- mPTP - a tool for single-locus species delimitation☆29Mar 14, 2026Updated 7 months ago
- IQ-TREE software version 2: phylogenetics by maximum likelihood☆337Jul 22, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Maximum likelihood inference of time stamped phylogenies and ancestral reconstruction☆257Oct 11, 2026Updated last week
- Homologizer: phasing gene copies into polyploid subgenomes☆13Feb 3, 2026Updated 8 months ago
- Annotation Pipeline for NLR genes☆17Dec 6, 2018Updated 7 years ago
- Mummer alignment tool☆576Feb 4, 2025Updated last year
- HyPhy 2.5.x (Maintenance Mode — bug fixes only). All active development has moved to HyPhy 3: https://github.com/veg/hyphy-3☆275Updated this week
- Reconstruct Ancestral State in Phylogenies☆32May 21, 2024Updated 2 years ago
- A hybrid summary method for reconstructing species tree from gene trees☆10Jan 6, 2021Updated 5 years ago