quadbio / scRNAseq_analysis_vignetteLinks
Tutorial for scRNA-seq data analysis beginners using R
☆221Updated 7 months ago
Alternatives and similar repositories for scRNAseq_analysis_vignette
Users that are interested in scRNAseq_analysis_vignette are comparing it to the libraries listed below
Sorting:
- Single cell RNA sequencing analysis course☆223Updated last week
- ☆274Updated 10 months ago
- ☆253Updated last year
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆295Updated 2 years ago
- Community-provided extensions to Seurat☆348Updated 10 months ago
- Analysis of single cell RNA-seq data course☆149Updated 3 years ago
- A package to help convert different single-cell data formats to each other☆442Updated last year
- SingleR: Single-cell RNA-seq cell types Recognition (legacy version)☆303Updated 5 years ago
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆272Updated last week
- Single-cell Transcriptome and Regulome Analysis Pipeline☆292Updated 2 years ago
- scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy…☆231Updated last week
- my notes for scATACseq analysis☆132Updated last year
- R package for integrating and analyzing multiple single-cell datasets☆421Updated last month
- A toolkit for single-cell immune profiling☆349Updated this week
- Single RNA-seq data analysis with R (Finland, May, 2019)☆226Updated 3 years ago
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆230Updated 2 years ago
- ☆359Updated 3 years ago
- A tool for detecting somatic variants in single cell data☆214Updated last year
- ☆176Updated 4 months ago
- Interpretation of cell states using reference single-cell maps☆293Updated last month
- ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)☆431Updated 7 months ago
- CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.☆358Updated 2 months ago
- Analysis Pipeline for Single Cell ATAC-seq☆319Updated 2 years ago
- ☆173Updated 3 weeks ago
- A guide to using a Seurat object in conjunction with RNA Velocity☆139Updated 3 years ago
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology.☆253Updated last month
- ☆409Updated 2 weeks ago
- I redo the ScRNA analysis in the paper of Wang et al 2020, Nat Comm. Here's my modified script for Helen He Zhu github (https://github.co…☆12Updated 4 years ago
- R package for detecting doublets in single-cell RNA sequencing data☆497Updated 6 months ago
- Useful functions to make your scRNA-seq plot more cool!☆360Updated 4 months ago