Core-Bioinformatics / ClustAssessLinks
Tools for assessing clustering robustness
☆25Updated this week
Alternatives and similar repositories for ClustAssess
Users that are interested in ClustAssess are comparing it to the libraries listed below
Sorting:
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 3 weeks ago
- ☆20Updated last year
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated last month
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 2 months ago
- ☆22Updated last year
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated 9 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆26Updated 3 years ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆21Updated last year
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆33Updated 3 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- ☆12Updated last year
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- ☆29Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 8 months ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Inference of TCR motifs☆32Updated last week
- R package for Flexible dot plots☆29Updated 3 years ago
- ☆49Updated 10 months ago
- ☆20Updated last year
- represent each cell in UMAP plots as a pie chart☆16Updated 3 years ago
- ☆32Updated 5 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- ☆34Updated last year
- ☆21Updated 3 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 2 months ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆25Updated 5 years ago
- Single-cell Mutual Information-based Network Engineering Ranger☆17Updated 3 weeks ago