Core-Bioinformatics / ClustAssessLinks
Tools for assessing clustering robustness
☆31Updated last week
Alternatives and similar repositories for ClustAssess
Users that are interested in ClustAssess are comparing it to the libraries listed below
Sorting:
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆45Updated 5 months ago
- Code to calculate the Splicing Z Score (SpliZ) for single cell RNA-seq splicing analysis☆35Updated 4 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆30Updated 5 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated last week
- ☆20Updated 2 years ago
- ☆23Updated 3 months ago
- Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are signif…☆39Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 6 years ago
- Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data☆22Updated last year
- Difference in Intercellular Communication from scRNA-seq data☆24Updated 3 months ago
- Code related to scRNA analysis using the scAmpi workflow☆27Updated 2 weeks ago
- ☆25Updated 3 years ago
- ☆29Updated 2 years ago
- ☆12Updated 4 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- ☆16Updated 4 years ago
- ☆23Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 10 months ago
- ☆26Updated 8 months ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 3 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 weeks ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Inference of TCR motifs☆32Updated 7 months ago
- R package for Flexible dot plots☆29Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- ☆39Updated 4 years ago
- scover☆24Updated 2 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 11 months ago
- Landscape Single Cell Entropy☆21Updated 5 years ago