quadbio / VoxHuntLinks
VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps
☆47Updated last year
Alternatives and similar repositories for VoxHunt
Users that are interested in VoxHunt are comparing it to the libraries listed below
Sorting:
- ☆36Updated this week
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 4 months ago
- ☆41Updated 2 years ago
- ☆45Updated last week
- Single cell RNA-seq analysis for transcriptomic type characterization☆37Updated last month
- ☆48Updated 7 years ago
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆35Updated last year
- Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and…☆36Updated 2 years ago
- A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA seq…☆65Updated last month
- ☆51Updated last week
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆56Updated 5 months ago
- characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular dens…☆81Updated 3 years ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 3 years ago
- Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.☆80Updated 7 months ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆85Updated last year
- Capybara: A computational tool to measure cell identity and fate transitions☆59Updated 3 years ago
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Updated 5 years ago
- iterative clustering pipeline of big single cell datasets.☆34Updated last month
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆61Updated last year
- Gene regulatory network containing signed transcription factor-target gene interactions☆89Updated 4 months ago
- ☆30Updated 3 years ago
- R package for pathway analysis in scRNA-seq data☆75Updated last year
- Cell-type Relationship Analysis Workflow Done Across Distances☆38Updated 4 months ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Updated 3 years ago
- R package for specialised analysis of single cell data☆39Updated 3 years ago
- R package for semi-supervised single-cell data integration☆90Updated 2 months ago
- User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins☆66Updated 3 weeks ago
- CellRank's reproducibility repository.☆15Updated 3 years ago
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Single-Cell Clustering Assessment Framework☆105Updated last year