SGDDNB / GeneSwitchesLinks
Ordering gene-expression and functional events in single-cell experiments
☆27Updated last year
Alternatives and similar repositories for GeneSwitches
Users that are interested in GeneSwitches are comparing it to the libraries listed below
Sorting:
- R package for SIGMA, a clusterability measure for scRNA-seq data☆12Updated 4 years ago
- Single-cell Case Control Analysis☆52Updated this week
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆17Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- R package of CSOmap(developing☆13Updated 3 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- ☆39Updated 3 months ago
- A record of the analysis pipelines used to create the HTAPP data☆34Updated 8 months ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Notebooks for generating figures in "Progressive Plasticity During Colorectal Cancer Metastasis"☆16Updated last year
- Landscape Single Cell Entropy☆21Updated 5 years ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- ☆10Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 8 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data☆35Updated last month
- Lung cancer 10X analysis☆11Updated 4 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 3 months ago
- ☆18Updated 3 years ago
- ☆62Updated last year
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆30Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆25Updated 5 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 5 months ago
- scripts for analyzing data of macrophage development in human☆10Updated 6 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated 2 years ago