Weighted gene co-expression network analysis for scRNA-seq data in Seurat
☆10Dec 15, 2023Updated 2 years ago
Alternatives and similar repositories for scWGCNA
Users that are interested in scWGCNA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)☆41Mar 31, 2026Updated last month
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆27Jan 23, 2024Updated 2 years ago
- ☆12Jul 25, 2019Updated 6 years ago
- ☆13Sep 8, 2020Updated 5 years ago
- Customized Variable Inspector extension for JupyterLab, better support for R.☆11Apr 19, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Aug 2, 2020Updated 5 years ago
- Rheumatoid Arthritis project. single cell RNA sequencing data.☆15May 31, 2021Updated 4 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆14May 2, 2019Updated 7 years ago
- Microbe-Metabolite INteractions-based metabolic profiles Predictor☆16Mar 17, 2023Updated 3 years ago
- Multithreaded Gephi Force Atlas2 Layout in 2 or 3-d☆23May 8, 2020Updated 6 years ago
- Codes used for all the data analysis steps in the paper "Single-cell transcriptomics identifies an effectorness gradient shaping the resp…☆16Apr 15, 2020Updated 6 years ago
- Single-cell Orientation Tracing☆22Jan 23, 2022Updated 4 years ago
- PROGENY Python implementation☆12Apr 5, 2022Updated 4 years ago
- Code to run the scHLApers pipeline for personalized single-cell HLA quantification☆18Jan 10, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Unsupervised Inference of Developmental Directions for Single Cells☆25Jan 12, 2024Updated 2 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆27May 12, 2020Updated 6 years ago
- Python implementation of Gene Trajectory☆30Sep 4, 2024Updated last year
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Dec 20, 2018Updated 7 years ago
- Predicted cell-cell interactions of the aging mouse brain☆21Sep 24, 2019Updated 6 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Jul 7, 2023Updated 2 years ago
- Dorothea package in Python☆11Apr 5, 2022Updated 4 years ago
- The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following …☆11May 15, 2021Updated 5 years ago
- Android Kernel Vulnerability (CVE-2019-2215) temporary root PoC☆15Dec 21, 2023Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆28Feb 6, 2019Updated 7 years ago
- ☆22Sep 2, 2025Updated 8 months ago
- scDrug: From scRNA-seq to Drug Repositioning☆45May 8, 2023Updated 3 years ago
- Code for the paper `Multiscale topology classifies and quantifies cell types in subcellular spatial transcriptomics"☆13Apr 23, 2024Updated 2 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆80Dec 14, 2023Updated 2 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Mar 7, 2022Updated 4 years ago
- single nuclei RNA-seq analysis toolbox☆10Oct 26, 2016Updated 9 years ago
- ☆18Aug 22, 2021Updated 4 years ago
- LncmiRSRN: Identifying lncRNA related miRNA sponge regulatory network☆13Feb 15, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Python application, generating parallel corpus for any language pairs, can be used for training nmt (Neural Machine Translation) systems☆12Dec 8, 2022Updated 3 years ago
- ☆10Feb 12, 2019Updated 7 years ago
- Spatial RNA velocity☆10Oct 3, 2024Updated last year
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆39Nov 16, 2021Updated 4 years ago
- Predict cell cycle phase in a continuum from single-cell RNA-seq data☆14Nov 14, 2020Updated 5 years ago
- Subplex Optimization Algorithm☆11Mar 23, 2026Updated 2 months ago
- Build predicted cell-cell interaction networks from single-cell data.☆10Jan 31, 2023Updated 3 years ago