ScialdoneLab / COMUNETLinks
COMUNET: a tool to explore and visualize intercellular communication
☆12Updated 5 years ago
Alternatives and similar repositories for COMUNET
Users that are interested in COMUNET are comparing it to the libraries listed below
Sorting:
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated 2 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆26Updated 5 years ago
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆20Updated 4 years ago
- Overview of the scripts used to analyse the brainimmuneatlas data☆19Updated 5 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Single-cell Orientation Tracing☆22Updated 4 years ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆31Updated 5 months ago
- Ordering gene-expression and functional events in single-cell experiments☆29Updated last year
- ☆29Updated 2 years ago
- Cluster Identity Predictor (R package implementation)☆21Updated 3 years ago
- Single-cell Case Control Analysis☆52Updated last week
- Marker gene selection from scRNA-seq data☆16Updated 5 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 7 months ago
- ☆12Updated 6 years ago
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 11 months ago
- Individual level Differential Expression Analysis for Single cells☆26Updated 3 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆46Updated 3 years ago
- ☆25Updated 6 months ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 3 years ago
- Algorithms for single-cell analysis☆29Updated 4 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Updated 2 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Landscape Single Cell Entropy☆21Updated 5 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 weeks ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆53Updated 2 months ago
- ☆43Updated 5 years ago
- Mitochondrial Alteration Enrichment and Genome Analysis Toolkit☆24Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 6 years ago
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆18Updated 2 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year