Alternatives and similar repositories for ggsc:

Users that are interested in ggsc are comparing it to the libraries listed below

• GangLiLab / genekitr
  🧬 Gene analysis toolkit based on R
  ☆56Updated 2 months ago
• kevinblighe / scDataviz
  scDataviz: single cell dataviz and downstream analyses
  ☆63Updated 3 years ago
• junjunlab / ggSCvis
  Visualizing SingleCell data Using GGplot2
  ☆31Updated 5 months ago
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆43Updated last year
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆59Updated 4 months ago
• showteeth / GEfetch2R
  GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools
  ☆35Updated 2 weeks ago
• zdebruine / singlet
  Single-cell analysis with non-negative matrix factorization
  ☆44Updated 4 months ago
• Sarah145 / CCPlotR
  An R package for visualising cell-cell interactions
  ☆43Updated 7 months ago
• phipsonlab / speckle
  R package for analysing single cell data
  ☆52Updated 2 years ago
• sajuukLyu / ggunchull
  A ggplot extension for drawing smooth non-convex circles around a set of points.
  ☆17Updated 10 months ago
• oganm / homologene
  An r package that works as a wrapper to homologene
  ☆43Updated last year
• jokergoo / ComplexHeatmap_v2_paper_code
  ☆20Updated 2 years ago
• wmacnair / SampleQC
  Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data
  ☆37Updated 2 years ago
• NMikolajewicz / scMiko
  R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…
  ☆27Updated last year
• Simon-Leonard / FlexDotPlot
  R package for Flexible dot plots
  ☆29Updated 2 years ago
• VCCRI / Sierra
  Discover differential transcript usage from polyA-captured single cell RNA-seq data
  ☆50Updated last year
• stemangiola / CuratedAtlasQueryR
  Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.
  ☆90Updated 3 months ago
• jeffsocal / tidyproteomics
  An S3 data object and framework for common quantitative proteomic analyses
  ☆40Updated last month
• jokergoo / cola
  A General Framework for Consensus Partitioning
  ☆61Updated last month
• EDePasquale / DoubletDecon
  A tool for removing doublets from single-cell RNA-seq data
  ☆73Updated 4 years ago
• almeidasilvaf / BioNERO
  Easy and comprehensive biological network reconstruction and analysis
  ☆27Updated 5 months ago
• lusystemsbio / NetAct
  Network construction Algorithm
  ☆21Updated 6 months ago
• kevinrue / velociraptor
  Toolkit for Single-Cell Velocity
  ☆54Updated 2 months ago
• guokai8 / scGSVA
  scGSVA: Perform GSVA for single cell RNA seq
  ☆55Updated 4 months ago
• niaid / dsb
  Normalize CITEseq Data
  ☆65Updated 9 months ago
• aet21 / EpiSCORE
  Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles
  ☆31Updated last year
• SingleR-inc / celldex
  Collection of cell type reference datasets.
  ☆50Updated 9 months ago
• PeeperLab / Rtoolbox
  Toolbox with R scripts
  ☆38Updated 6 years ago
• romanhaa / cerebroApp
  R package containing the Cerebro application.
  ☆40Updated 3 years ago
• Qile0317 / APackOfTheClones
  Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of …
  ☆15Updated 4 months ago