YuLab-SMU / ggscLinks
🧠 Visualizing Single Cell and Spatial Transcriptomics
☆47Updated 2 months ago
Alternatives and similar repositories for ggsc
Users that are interested in ggsc are comparing it to the libraries listed below
Sorting:
- scDataviz: single cell dataviz and downstream analyses☆63Updated 3 years ago
- Single-cell analysis with non-negative matrix factorization☆44Updated 8 months ago
- A ggplot extension for drawing smooth non-convex circles around a set of points.☆16Updated last year
- Identify and correct invalid gene symbols☆58Updated 7 months ago
- Visualizing SingleCell data Using GGplot2☆34Updated 8 months ago
- Enrichment Networks for Pathway Enrichment Analysis☆53Updated 2 years ago
- R package for Flexible dot plots☆29Updated 3 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- ☆20Updated 2 years ago
- Toolbox with R scripts☆38Updated 6 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆32Updated 2 months ago
- R package for analysing single cell data☆55Updated 2 years ago
- R package containing the Cerebro application.☆40Updated 3 years ago
- A General Framework for Consensus Partitioning☆62Updated 4 months ago
- 🧬 Gene analysis toolkit based on R☆57Updated 5 months ago
- Toolkit for Single-Cell Velocity☆56Updated 5 months ago
- Clone of the Bioconductor repository for the DropletUtils package.☆59Updated last week
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆51Updated last year
- An R package for visualising cell-cell interactions☆44Updated 10 months ago
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆29Updated 2 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆63Updated 3 years ago
- ☆41Updated 4 years ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆92Updated 6 months ago
- ☆47Updated last year
- An R package to analyze single-cell V(D)J data☆28Updated last year
- Coarse-graining of large single-cell RNA-seq data into metacells☆81Updated 9 months ago
- Pseudotime Analysis for Bulk Data☆15Updated 10 months ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆38Updated 3 years ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆36Updated 2 months ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆33Updated 3 weeks ago