GreenleafLab / scScalpChromatinLinks
☆31Updated 2 years ago
Alternatives and similar repositories for scScalpChromatin
Users that are interested in scScalpChromatin are comparing it to the libraries listed below
Sorting:
- Functional Inference of Gene Regulation☆49Updated last year
- ☆39Updated 4 months ago
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 4 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆82Updated 8 months ago
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 5 months ago
- R package IReNA☆29Updated last year
- ☆18Updated last year
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆31Updated 3 years ago
- scWGCNA☆61Updated 3 years ago
- Gene Set + S2G strategy annotations analyzed for disease architecture☆58Updated 3 years ago
- ☆32Updated 11 months ago
- ☆53Updated last year
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- cell type specific, trait-associated gene regulation☆29Updated 9 months ago
- An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)☆37Updated last year
- R package to detect breakpoints and assign somies to scATAC-seq data☆42Updated last month
- This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…☆26Updated last year
- ☆15Updated 2 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- ☆40Updated 6 months ago
- Code used to process the data of the HBCA project☆32Updated last year
- ☆61Updated last month
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- ☆33Updated 4 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆93Updated 7 months ago
- Cell age determination by scATAC-seq and bulk-ATAC-seq☆32Updated last year
- All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs☆41Updated 2 years ago
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆41Updated 11 months ago