☆31Sep 22, 2023Updated 2 years ago
Alternatives and similar repositories for scScalpChromatin
Users that are interested in scScalpChromatin are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆29Sep 20, 2022Updated 3 years ago
- An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)☆40Aug 22, 2024Updated 2 years ago
- ☆10Dec 11, 2024Updated last year
- Supplementary files and notebooks to recreate figures.☆23Aug 4, 2026Updated 3 weeks ago
- ☆19Dec 15, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- The scripts used for analyzing JAX mouse dataset☆28Oct 24, 2024Updated last year
- ☆11Apr 4, 2023Updated 3 years ago
- Functional Inference of Gene Regulation☆55Jul 5, 2024Updated 2 years ago
- ☆12Dec 4, 2023Updated 2 years ago
- Accompanying repository for GkmExplain paper☆24Aug 20, 2020Updated 6 years ago
- TWAS-pipeline☆24Feb 21, 2021Updated 5 years ago
- Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1☆18Apr 24, 2020Updated 6 years ago
- ☆21Aug 26, 2024Updated 2 years ago
- All code associated with manuscript detailing scATAC and scRNA-seq following stimulus of PBMCs☆42Mar 20, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆10Mar 11, 2025Updated last year
- SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) a…☆262Jan 16, 2026Updated 7 months ago
- ☆10Sep 27, 2022Updated 3 years ago
- A tool to plot significant regions of GWAS☆30Jan 27, 2023Updated 3 years ago
- ☆69Apr 22, 2026Updated 4 months ago
- EpiGePT: a pretrained transformer-based language model for context-specific human epigenomics☆34Jun 22, 2025Updated last year
- spatialDLPFC project involving Visium (n = 30), Visium SPG (n = 4) and snRNA-seq (n = 19) samples☆33Aug 14, 2026Updated 2 weeks ago
- Make interactive LocusZoom plots from a local GWAS file☆10May 9, 2025Updated last year
- Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.☆60Mar 20, 2026Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- This repository contains codes used for the human fetal limb cell atlas.☆17Jan 28, 2025Updated last year
- ☆15Apr 11, 2024Updated 2 years ago
- Analyses of Ribo-seq rRNA fragments for Differential Ribosome Heterogeneity and Collision predictions☆16Aug 5, 2026Updated 3 weeks ago
- R package IReNA☆31Nov 13, 2024Updated last year
- Gene Set + S2G strategy annotations analyzed for disease architecture☆62Nov 18, 2022Updated 3 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆22Aug 19, 2025Updated last year
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆84Apr 16, 2026Updated 4 months ago
- Whole mouse brain snATAC seq analysis☆29Apr 18, 2025Updated last year
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Code and data related to the meta-analysis of fat distribution in UK Biobank and GIANT☆23Dec 5, 2018Updated 7 years ago
- This repository holds the scripts used to analyze the data presented in "A multi-omic single-cell landscape of human gynecologic malignan…☆53Nov 10, 2023Updated 2 years ago
- The official implementation for "SANGO".☆11Mar 17, 2024Updated 2 years ago
- Code for the BRAIN Initiative Cell Census Network (BICCN) - RF1 Tilgner☆23May 1, 2024Updated 2 years ago
- Toy files and training material to introduce Linux to molecular biologists☆22Jul 21, 2023Updated 3 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 4 years ago
- Analysis pipeline for ATAC-seq data☆91Oct 30, 2023Updated 2 years ago