quadbio / RNAseq_tutorialLinks
☆28Updated 8 months ago
Alternatives and similar repositories for RNAseq_tutorial
Users that are interested in RNAseq_tutorial are comparing it to the libraries listed below
Sorting:
- ☆32Updated 5 months ago
- scWGCNA☆61Updated 2 years ago
- ☆49Updated 10 months ago
- scTyper: a comprehensive pipeline for the cell typing analysis of single-cell RNA-seq data☆30Updated 2 years ago
- A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data☆27Updated 2 months ago
- Code repository for single cell RNA-seq☆35Updated 4 years ago
- single-cell clustering based on alternative splicing landscapes☆21Updated last year
- An R package to plot maps of clone distributions in somatic evolution☆17Updated last year
- single-cell-Isoform-Sequencing-Analysis-Tools: New and powerful tools brings single-cell RNA sequencing to the Isoform level and single m…☆24Updated 11 months ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆48Updated 10 months ago
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆40Updated 3 years ago
- Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…☆29Updated 4 years ago
- ☆20Updated 9 months ago
- ☆17Updated last year
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- ☆39Updated 3 years ago
- This is a package and a shell script for alternative polyadenylation (APA) analysis of 3' tag single-cell RNA-seq data.☆19Updated 3 years ago
- Gene set enrichment analysis for single-cell RNAseq data☆28Updated 2 years ago
- ☆47Updated 5 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆43Updated 4 years ago
- SCRIP(Single Cell Regulatory network Inference using ChIP-seq) is a tool for evaluating the binding enrichment of specific TR at single-c…☆20Updated 11 months ago
- R package of CSOmap(developing☆14Updated 3 years ago
- Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.☆18Updated 3 weeks ago
- ☆27Updated 3 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated 2 years ago