NBISweden / workshop-scRNAseq
Single cell RNA sequencing analysis course
☆212Updated last month
Alternatives and similar repositories for workshop-scRNAseq
Users that are interested in workshop-scRNAseq are comparing it to the libraries listed below
Sorting:
- Analysis of single cell RNA-seq data course☆136Updated 2 years ago
- Single-cell Transcriptome and Regulome Analysis Pipeline☆281Updated 2 years ago
- my notes for scATACseq analysis☆125Updated last year
- ☆262Updated 6 months ago
- Tutorial for scRNA-seq data analysis beginners using R☆197Updated 2 months ago
- Analysis Pipeline for Single Cell ATAC-seq☆317Updated 2 years ago
- ☆233Updated 10 months ago
- SingleR: Single-cell RNA-seq cell types Recognition (legacy version)☆295Updated 4 years ago
- A guide to using a Seurat object in conjunction with RNA Velocity☆138Updated 3 years ago
- TCR and BCR assembly from RNA-seq data☆305Updated 2 weeks ago
- Interpretation of cell states using reference single-cell maps☆273Updated this week
- A toolkit for single-cell immune profiling☆332Updated last week
- A package to help convert different single-cell data formats to each other☆422Updated last year
- A tool for detecting somatic variants in single cell data☆203Updated 8 months ago
- Intro to ChIPseq using HPC☆304Updated 2 years ago
- Cell types enrichment analysis☆195Updated 11 months ago
- Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)☆283Updated this week
- R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data☆276Updated 2 years ago
- Table of software for the analysis of single-cell RNA-seq data.☆323Updated this week
- ☆194Updated last month
- T/B cell receptor sequencing analysis notes☆250Updated 5 months ago
- CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.☆326Updated 9 months ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆213Updated 3 months ago
- Step-by-step analysis pipeline for RNA-seq data☆114Updated last year
- Automatic Annotation on Cell Types of Clusters from Single-Cell RNA Sequencing Data☆227Updated 2 years ago
- EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.☆199Updated last year
- Clone of the Bioconductor repository for the SingleR package.☆189Updated 3 months ago
- Single RNA-seq data analysis with R (Finland, May, 2019)☆223Updated 2 years ago
- ☆355Updated 3 years ago
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆168Updated 4 years ago